Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 3.4e-88 328.9 261 100.0
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 3.8e-71 272.3 254 91.3
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.6e-64 250.4 247 89.5
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 4.2e-46 189.1 254 75.6
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 4.7e-45 185.7 233 76.8
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 5.2e-44 182.2 241 76.3
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 3.4e-43 179.5 232 74.6
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 1.7e-42 177.2 239 76.2
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 5.9e-40 168.7 236 69.9
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 5.9e-40 168.7 233 73.8
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 5.9e-40 168.7 248 69.0
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 2.9e-39 166.4 251 72.1
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 6.6e-39 165.2 259 70.7
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 1.9e-38 163.7 233 71.2
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 3.3e-38 162.9 236 70.3
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 5.6e-38 162.2 252 69.4
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 7.3e-38 161.8 243 70.0
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.2e-37 161.0 238 71.4
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 2.1e-37 160.2 246 68.3
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 2.8e-37 159.8 236 72.5
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 3.6e-37 159.5 237 69.6
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 6.1e-37 158.7 237 74.3
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 5.2e-36 155.6 235 71.9
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 6.8e-36 155.2 234 71.4
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 2.0e-35 153.7 234 71.4
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.7e-35 152.1 242 71.9
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 7.5e-35 151.8 229 72.1
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 7.5e-35 151.8 234 70.9
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 7.5e-35 151.8 243 69.5
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 9.8e-35 151.4 236 70.3
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.7e-34 150.6 229 72.1
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.2e-34 150.2 242 71.5
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 2.2e-34 150.2 233 67.8
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.7e-34 149.4 230 71.7
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 3.7e-34 149.4 235 71.9
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 4.9e-34 149.1 234 69.7
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 6.4e-34 148.7 238 55.5
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 8.3e-34 148.3 236 69.1
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 2.4e-33 146.7 236 70.3
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 3.2e-33 146.4 254 65.0
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 4.1e-33 146.0 254 66.9
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 9.2e-33 144.8 234 69.7
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 1.2e-32 144.4 236 69.1
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 1.6e-32 144.1 242 69.4
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 1.6e-32 144.1 250 64.8
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 2.7e-32 143.3 236 66.9
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 4.6e-32 142.5 237 69.6
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 4.6e-32 142.5 247 65.6
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 7.8e-32 141.7 237 66.2
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 1.0e-31 141.4 239 67.8
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 1.7e-31 140.6 250 66.4
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 1.1e-30 137.9 253 62.5
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 1.1e-30 137.9 233 66.1
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 3.3e-30 136.3 203 77.8
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 4.3e-30 136.0 245 65.7
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 1.4e-28 131.0 238 67.6
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 3.1e-28 129.8 311 55.0
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 5.2e-28 129.0 237 65.4
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.5e-27 127.5 238 63.9
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 1.5e-27 127.5 237 64.6
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.5e-27 127.5 238 64.7
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 3.4e-27 126.3 238 65.1
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 5.8e-27 125.6 213 70.4
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 9.8e-27 124.8 237 65.4
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 1.3e-26 124.4 247 61.9
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 1.3e-26 124.4 247 61.9
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 1.3e-26 124.4 247 63.2
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 1.3e-26 124.4 247 63.2
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 1.7e-26 124.0 174 78.7
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 6.4e-26 122.1 71 80.3
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 1.1e-25 121.3 242 63.6
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 1.4e-25 120.9 247 62.8
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 1.9e-25 120.6 83 69.9
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 3.2e-25 119.8 69 79.7
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 4.1e-25 119.4 83 69.9
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 5.4e-25 119.0 68 82.4
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 5.4e-25 119.0 250 63.6
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 5.4e-25 119.0 250 63.6
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 5.4e-25 119.0 266 60.5
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 5.4e-25 119.0 235 63.8
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 9.2e-25 118.2 252 60.3
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 2.0e-24 117.1 68 79.4
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 6.0e-24 115.5 202 73.3
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 7.8e-24 115.2 187 56.1
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 7.8e-24 115.2 261 59.8
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.0e-23 114.8 69 76.8
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 1.3e-23 114.4 234 62.0
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 6.6e-23 112.1 194 69.1
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 8.6e-23 111.7 240 51.7
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 1.6e-21 107.5 233 61.4
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 2.1e-21 107.1 234 63.2
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 2.8e-21 106.7 59 84.7
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 4.7e-21 105.9 238 62.6
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 5.2e-20 102.4 242 60.3
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.5e-19 100.9 278 55.8
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 2.6e-19 100.1 364 45.1
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 4.4e-19 99.4 195 71.3
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 1.7e-18 97.4 235 60.9
Sabra01G0100900 Salix brachista HOM05D006475 ORTHO05D007969 1.7e-18 97.4 166 41.6
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 4.9e-18 95.9 69 62.3
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 1.1e-17 94.7 90 57.8
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 5.4e-17 92.4 69 66.7
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 1.2e-16 91.3 68 61.8
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 1.6e-16 90.9 253 57.7
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 1.6e-16 90.9 241 54.8
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.1e-16 90.5 201 33.8
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 3.5e-16 89.7 263 54.8
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 4.3e-14 82.8 217 59.4
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 4.3e-14 82.8 101 51.5
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.8e-13 80.1 197 50.3
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 6.2e-13 79.0 211 61.6
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 2.3e-12 77.0 187 44.9
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 1.2e-11 74.7 251 54.2
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 8.4e-10 68.6 51 56.9
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 7.1e-09 65.5 195 62.1
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.2e-08 64.7 45 64.4
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.1e-08 63.9 34 82.4
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.0e-07 61.6 36 80.6
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.7e-07 60.8 36 80.6


User provided reference genes

Program Settings