Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 2.0e-175 619.0 308 100.0
Sabra03G0068500 Salix brachista HOM05D001237 ORTHO05D009110 1.7e-139 499.6 282 89.7
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 5.4e-133 478.0 314 79.3
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 4.3e-130 468.4 309 75.4
GSVIVG01022633001 Vitis vinifera HOM05D001237 ORTHO05D009110 9.5e-130 467.2 323 74.3
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.2e-129 466.8 309 75.1
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 1.6e-129 466.5 309 75.1
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.6e-129 466.5 315 74.0
CiPaw.12G070700 Carya illinoinensis HOM05D001237 ORTHO05D009110 2.3e-128 462.6 303 76.9
RcHm_v2.0_Chr7g0213081 Rosa chinensis HOM05D001237 ORTHO05D009110 2.3e-128 462.6 263 84.8
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 5.2e-128 461.5 340 71.5
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 5.2e-128 461.5 260 85.8
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 4.4e-127 458.4 319 73.7
TAR629G2165 Trochodendron aralioides HOM05D001237 ORTHO05D009110 4.4e-127 458.4 325 73.2
Prupe.5G022700 Prunus persica HOM05D001237 ORTHO05D009110 5.8e-127 458.0 273 81.7
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 7.5e-127 457.6 256 86.3
Nitab4.5_0002735g0030 Nicotiana tabacum HOM05D001237 ORTHO05D009110 9.9e-127 457.2 261 85.1
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 2.2e-126 456.1 323 72.1
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 2.9e-126 455.7 257 86.4
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 3.7e-126 455.3 311 73.3
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 5.4e-125 451.4 325 72.3
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 7.1e-125 451.1 261 83.9
Oeu038592.1 Olea europaea HOM05D001237 ORTHO05D009110 7.1e-125 451.1 259 85.3
Actinidia18147 Actinidia chinensis HOM05D001237 ORTHO05D009110 1.2e-124 450.3 312 74.4
CAN.G773.2 Capsicum annuum HOM05D001237 ORTHO05D009110 1.6e-124 449.9 308 73.1
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 2.1e-124 449.5 262 82.8
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 2.1e-124 449.5 304 76.0
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 2.7e-124 449.1 302 74.2
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 3.5e-124 448.7 316 72.8
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 1.0e-123 447.2 256 84.8
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 1.7e-123 446.4 328 71.3
Solyc08g075990.3 Solanum lycopersicum HOM05D001237 ORTHO05D009110 2.3e-123 446.0 302 73.8
VMungo1215G0366 Vigna mungo HOM05D001237 ORTHO05D000217 6.6e-123 444.5 328 71.0
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 1.5e-122 443.4 258 81.8
Rhsim07G0137000 Rhododendron simsii HOM05D001237 ORTHO05D009110 1.9e-122 443.0 329 71.7
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 4.3e-122 441.8 319 71.8
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 7.3e-122 441.0 260 83.8
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 9.5e-122 440.7 263 81.4
Sc07g0008510 Simmondsia chinensis HOM05D001237 ORTHO05D009110 1.2e-121 440.3 311 72.3
Lj2g0015654 Lotus japonicus HOM05D001237 ORTHO05D009110 1.6e-121 439.9 261 82.0
MELO3C013804.2 Cucumis melo HOM05D001237 ORTHO05D009110 2.1e-121 439.5 273 79.5
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla HOM05D001237 ORTHO05D009110 2.8e-121 439.1 331 70.7
Lalb_Chr05g0215521 Lupinus albus HOM05D001237 ORTHO05D009110 2.8e-121 439.1 274 79.2
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 6.2e-121 438.0 267 79.8
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 8.1e-121 437.6 256 83.2
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 8.1e-121 437.6 273 78.0
COL.COLO4_27340 Corchorus olitorius HOM05D001237 ORTHO05D009110 1.1e-120 437.2 257 82.1
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 2.4e-120 436.0 256 82.8
Migut.E01337 Erythranthe guttata HOM05D001237 ORTHO05D009110 3.1e-120 435.6 259 81.5
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 1.2e-119 433.7 260 81.2
EL10Ac5g11946 Beta vulgaris HOM05D001237 ORTHO05D009110 1.5e-119 433.3 254 82.7
DCAR_024946 Daucus carota HOM05D001577 ORTHO05D009110 2.6e-119 432.6 255 80.8
Medtr5g027220 Medicago truncatula HOM05D001237 ORTHO05D009110 3.4e-119 432.2 258 81.8
CSS0010822 Camellia sinensis var. sinensis HOM05D001237 ORTHO05D009110 7.6e-119 431.0 330 70.3
PSO782G3536 Papaver somniferum HOM05D001237 ORTHO05D009110 7.6e-119 431.0 312 69.6
THA.LOC104812764 Tarenaya hassleriana HOM05D001237 ORTHO05D009110 1.4e-117 426.8 286 74.1
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 3.2e-117 425.6 262 79.0
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 5.4e-117 424.9 266 77.4
Zm00001eb208900 Zea mays HOM05D001237 ORTHO05D009110 7.1e-117 424.5 326 69.0
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 2.1e-116 422.9 253 82.2
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 2.7e-116 422.5 257 81.3
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 3.9e-115 418.7 254 79.1
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 1.1e-114 417.2 254 78.7
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 1.5e-114 416.8 262 77.1
C07p39410 Brassica napus HOM05D001237 ORTHO05D009110 5.6e-114 414.8 262 76.7
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 7.3e-114 414.5 308 67.2
Ca_25144_v3 Cicer arietinum L. HOM05D001237 ORTHO05D000217 1.2e-113 413.7 256 79.7
Glyma.01G147700 Glycine max HOM05D001237 ORTHO05D009110 1.6e-113 413.3 328 66.8
Thhalv10004626m.g Eutrema salsugineum HOM05D001237 ORTHO05D009110 4.7e-113 411.8 262 77.1
Aa31LG9G15560 Aethionema arabicum HOM05D001237 ORTHO05D009110 2.4e-112 409.5 328 66.5
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 4.0e-112 408.7 313 66.1
Lsat_1_v5_gn_6_17621 Lactuca sativa HOM05D001237 ORTHO05D009110 5.2e-112 408.3 267 76.0
Dinv15842 Davidia involucrata HOM05D001237 ORTHO05D009110 9.0e-112 407.5 300 70.3
Peaxi162Scf00408g00416 Petunia axillaris HOM05D001237 ORTHO05D009110 2.6e-111 406.0 275 76.4
BolC7t44460H Brassica oleracea HOM05D001237 ORTHO05D009110 2.2e-110 402.9 252 76.6
Glyma.20G094800 Glycine max HOM05D001237 ORTHO05D009110 2.5e-106 389.4 226 84.1
CDE02G0540 Ceratophyllum demersum HOM05D001237 ORTHO05D009110 4.8e-105 385.2 237 78.9
BcaC06g30758 Brassica carinata HOM05D001237 ORTHO05D009110 4.2e-101 372.1 262 71.8
ClCG10G001120 Citrullus lanatus HOM05D001237 ORTHO05D009110 7.9e-100 367.9 314 63.4
HanXRQChr08g0226791 Helianthus annuus HOM05D001237 ORTHO05D009110 1.3e-99 367.1 230 80.0
CARHR182950 Cardamine hirsuta HOM05D001237 ORTHO05D009110 3.4e-95 352.4 213 79.3
SGA_v2.0_scaffold111G31373 Striga asiatica HOM05D001237 ORTHO05D009110 2.2e-94 349.7 203 83.3
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 1.9e-93 346.7 258 64.7
unitig_747.g21357 Utricularia gibba HOM05D000467 ORTHO05D000379 9.3e-93 344.4 223 76.2
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 4.0e-88 328.9 277 58.1
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 1.0e-83 314.3 270 55.6
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 5.5e-77 292.0 243 57.6
CBR_g18855 Chara braunii HOM05D001237 ORTHO05D009110 1.4e-72 277.3 230 59.1
arahy.Tifrunner.gnm1.ann1.3EKV6C Arachis hypogaea HOM05D001237 ORTHO05D009110 5.9e-71 271.9 293 55.6
arahy.Tifrunner.gnm1.ann1.YIEM7C Arachis hypogaea HOM05D001237 ORTHO05D009110 5.9e-71 271.9 293 55.6
QL12p001026 Quercus lobata HOM05D001237 ORTHO05D009110 7.9e-68 261.5 147 86.4
Glyma.09G212000 Glycine max HOM05D001237 ORTHO05D009110 2.3e-67 260.0 176 73.9
Hund11115 Selenicereus undatus HOM05D001237 ORTHO05D009110 3.1e-64 249.6 152 81.6
RcHm_v2.0_Chr7g0213121 Rosa chinensis HOM05D001237 ORTHO05D009110 1.5e-58 230.7 250 54.0
SEGI_12758 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 2.0e-55 220.3 133 75.9
Cre04.g212500 Chlamydomonas reinhardtii HOM05D001237 ORTHO05D009110 6.1e-52 208.8 281 44.5
HPP92_025933 Vanilla planifolia HOM05D001237 ORTHO05D009110 4.2e-45 186.0 128 72.7
PRCOL_00004822 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 2.7e-44 183.3 270 40.7
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 2.3e-43 180.3 276 37.0
Lju2073A0T61 Lonicera japonica HOM05D001237 ORTHO05D009110 1.1e-40 171.4 112 75.9
Sopen09g023280 Solanum pennellii HOM05D001237 ORTHO05D009110 1.3e-38 164.5 98 79.6
Gohir.D08G172350 Gossypium hirsutum HOM05D001237 ORTHO05D009110 4.9e-33 146.0 79 81.0
SalBow1G6490 Salvia bowleyana HOM05D001237 ORTHO05D009110 1.8e-27 127.5 92 66.3
FAN04G3094 Fragaria x ananassa HOM05D001237 ORTHO05D009110 9.2e-24 115.2 114 55.3
PRCOL_00006184 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 1.3e-22 111.3 282 28.7
MCO12G167 Micromonas commoda HOM05D001237 ORTHO05D009110 3.0e-22 110.2 324 28.1
SEGI_16157 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 7.3e-21 105.5 86 60.5
Gohir.D08G172400 Gossypium hirsutum HOM05D001237 ORTHO05D009110 7.5e-18 95.5 80 63.8
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 2.0e-10 70.9 330 23.9
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 3.4e-10 70.1 276 26.1
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 3.4e-10 70.1 278 27.3
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 4.4e-10 69.7 280 27.5
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 9.9e-10 68.6 274 26.3
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 1.3e-09 68.2 292 28.1
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 1.7e-09 67.8 295 26.8
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 2.2e-09 67.4 331 25.4
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 2.2e-09 67.4 313 26.8
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 4.9e-09 66.2 274 25.9
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 4.9e-09 66.2 299 26.1
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 6.4e-09 65.9 301 24.6
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 6.4e-09 65.9 299 26.1
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 8.3e-09 65.5 340 25.9
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 1.1e-08 65.1 276 26.1
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 1.1e-08 65.1 334 25.1
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 1.1e-08 65.1 315 25.1
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 1.4e-08 64.7 327 26.0
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 1.4e-08 64.7 328 26.2
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 1.9e-08 64.3 279 24.7
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 2.4e-08 63.9 279 25.1
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 2.4e-08 63.9 330 23.9
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 3.2e-08 63.5 299 25.8
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 3.2e-08 63.5 299 25.8
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 3.2e-08 63.5 276 26.8
vmacro14221 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 3.2e-08 63.5 45 71.1
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 4.1e-08 63.2 287 24.7
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 5.4e-08 62.8 297 25.3
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 9.2e-08 62.0 274 24.8
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 9.2e-08 62.0 303 24.8
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 1.2e-07 61.6 274 25.2
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 2.1e-07 60.8 327 25.1
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 2.7e-07 60.5 277 27.4
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 3.5e-07 60.1 278 25.9
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 7.8e-07 58.9 278 24.8
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 7.8e-07 58.9 300 24.0
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 1.0e-06 58.5 279 24.7
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 3.0e-06 57.0 279 24.0
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 5.1e-06 56.2 279 24.7
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 8.6e-06 55.5 278 25.5


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