Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 3.3e-76 288.5 168 100.0
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.7e-62 242.3 166 78.9
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 1.7e-56 223.0 257 60.3
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 2.2e-51 206.1 208 59.6
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 2.0e-36 156.4 177 66.1
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.3e-35 153.7 176 61.9
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 2.4e-34 149.4 176 65.9
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 5.3e-34 148.3 173 54.3
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 7.0e-34 147.9 181 55.8
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 9.1e-34 147.5 181 62.4
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.6e-33 146.7 181 63.5
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 7.7e-33 144.4 176 61.4
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 2.9e-32 142.5 176 61.4
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 5.0e-32 141.7 178 51.7
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.5e-32 141.4 171 65.5
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.1e-31 140.6 171 65.5
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.5e-31 140.2 172 65.1
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 3.2e-31 139.0 177 51.4
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 9.4e-31 137.5 172 54.1
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 1.2e-30 137.1 182 59.3
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.6e-30 136.7 174 59.8
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 2.1e-30 136.3 173 54.3
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 2.1e-30 136.3 176 52.8
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 2.1e-30 136.3 182 50.0
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 2.7e-30 136.0 178 49.4
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 2.7e-30 136.0 171 63.7
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.7e-30 136.0 171 63.7
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 4.7e-30 135.2 173 53.8
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.8e-29 133.3 171 62.6
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 1.8e-29 133.3 174 52.3
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.8e-29 133.3 171 50.3
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.3e-29 132.9 184 51.1
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 5.2e-29 131.7 180 46.7
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 6.8e-29 131.3 175 60.6
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 6.8e-29 131.3 181 49.2
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 8.8e-29 131.0 177 50.8
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 1.2e-28 130.6 177 52.5
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 1.2e-28 130.6 172 53.5
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 1.5e-28 130.2 181 46.4
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.5e-28 130.2 181 47.0
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.5e-28 130.2 181 47.0
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 1.5e-28 130.2 191 48.7
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.5e-28 130.2 181 45.9
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.6e-28 129.4 178 52.2
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.6e-28 129.4 178 52.2
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 2.6e-28 129.4 180 46.7
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 2.6e-28 129.4 180 46.7
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 2.6e-28 129.4 177 60.5
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 3.4e-28 129.0 184 47.3
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 4.4e-28 128.6 182 46.2
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 5.7e-28 128.3 185 47.0
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 5.7e-28 128.3 180 48.3
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 5.7e-28 128.3 180 48.3
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 5.7e-28 128.3 182 47.8
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 7.5e-28 127.9 184 49.5
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 7.5e-28 127.9 180 48.3
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 1.3e-27 127.1 170 52.9
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 1.7e-27 126.7 181 48.6
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 3.7e-27 125.6 187 47.1
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 4.8e-27 125.2 175 50.3
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 4.8e-27 125.2 177 48.0
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 6.3e-27 124.8 180 47.8
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 6.3e-27 124.8 176 58.5
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 6.3e-27 124.8 176 47.2
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 1.1e-26 124.0 168 48.2
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 1.4e-26 123.6 175 49.1
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.4e-26 123.6 169 48.5
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.4e-26 123.6 176 46.6
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 7.0e-26 121.3 175 45.7
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 7.0e-26 121.3 172 57.6
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 1.6e-25 120.2 178 44.9
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 2.7e-25 119.4 172 48.3
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 4.5e-25 118.6 178 47.8
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 5.9e-25 118.2 167 50.9
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 7.7e-25 117.9 155 52.3
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 1.7e-24 116.7 176 47.7
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 2.2e-24 116.3 177 46.3
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 2.2e-24 116.3 176 48.9
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 3.8e-24 115.5 174 47.1
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.1e-23 114.0 154 47.4
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 1.5e-23 113.6 170 44.1
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 2.5e-23 112.8 169 45.0
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 9.4e-23 110.9 171 43.9
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 2.7e-22 109.4 176 40.9
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 1.4e-21 107.1 95 60.0
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 6.8e-21 104.8 146 50.0
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 5.7e-20 101.7 168 41.1
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 5.7e-20 101.7 168 41.1
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 6.3e-19 98.2 133 46.6
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 2.4e-18 96.3 254 39.0
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 7.0e-18 94.7 55 83.6
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 1.2e-17 94.0 168 41.7
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 1.2e-17 94.0 141 48.2
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 1.6e-17 93.6 91 57.1
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 2.0e-17 93.2 173 42.2
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 3.5e-17 92.4 168 41.7
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 3.8e-16 89.0 146 57.5
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 5.0e-16 88.6 63 74.6
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 8.6e-16 87.8 63 69.8
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 1.1e-15 87.4 91 52.7
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 1.9e-15 86.7 63 68.3
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 4.3e-15 85.5 148 46.6
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 5.6e-15 85.1 76 59.2
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 1.6e-14 83.6 135 51.1
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 6.1e-14 81.6 147 45.6
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 4.0e-13 79.0 157 47.1
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 1.2e-12 77.4 63 63.5
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 7.5e-12 74.7 63 60.3
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 1.3e-11 73.9 132 48.5
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 7.8e-09 64.7 67 49.3
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 1.3e-08 63.9 61 55.7
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 2.3e-08 63.2 66 50.0
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 3.9e-08 62.4 133 35.3
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 9.5e-07 57.8 190 34.7
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 3.6e-06 55.8 33 75.8


User provided reference genes

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