Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 2.4e-42 175.3 98 100.0
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 1.9e-31 139.0 88 84.1
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 1.2e-30 136.3 88 83.0
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 4.1e-26 121.3 88 71.6
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 1.2e-25 119.8 89 70.8
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 1.2e-25 119.8 89 80.9
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 1.5e-25 119.4 92 68.5
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 5.9e-25 117.5 88 80.7
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 5.0e-24 114.4 85 69.4
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 1.1e-23 113.2 88 67.0
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 1.5e-23 112.8 91 62.6
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 3.2e-23 111.7 89 78.7
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 5.5e-23 110.9 88 64.8
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 1.2e-22 109.8 90 63.3
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.6e-22 109.4 93 63.4
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.1e-22 109.0 93 63.4
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.1e-22 109.0 93 63.4
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 2.7e-22 108.6 86 65.1
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 3.6e-22 108.2 90 62.2
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 3.6e-22 108.2 86 65.1
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 4.7e-22 107.8 86 64.0
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 6.1e-22 107.5 93 62.4
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 6.1e-22 107.5 93 62.4
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 6.1e-22 107.5 93 62.4
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 1.4e-21 106.3 90 62.2
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 1.8e-21 105.9 88 62.5
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 2.3e-21 105.5 86 64.0
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 2.3e-21 105.5 88 62.5
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 3.0e-21 105.1 88 63.6
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 4.0e-21 104.8 86 64.0
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 4.0e-21 104.8 93 62.4
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 4.0e-21 104.8 90 55.6
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 5.2e-21 104.4 91 57.1
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 5.2e-21 104.4 87 70.1
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 5.2e-21 104.4 90 57.8
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 5.2e-21 104.4 89 66.3
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 6.7e-21 104.0 90 63.3
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 8.8e-21 103.6 93 61.3
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 1.1e-20 103.2 86 62.8
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 1.1e-20 103.2 86 59.3
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 1.1e-20 103.2 91 54.9
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 1.1e-20 103.2 88 62.5
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 1.1e-20 103.2 88 69.3
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 1.1e-20 103.2 88 62.5
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 1.5e-20 102.8 90 55.6
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 2.6e-20 102.1 106 65.1
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 2.6e-20 102.1 84 59.5
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 2.6e-20 102.1 86 58.1
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 2.6e-20 102.1 91 56.0
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 7.4e-20 100.5 88 65.9
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 1.3e-19 99.8 86 59.3
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 1.7e-19 99.4 92 69.6
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 1.7e-19 99.4 106 63.2
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 2.8e-19 98.6 88 65.9
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 2.8e-19 98.6 89 57.3
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 3.7e-19 98.2 88 67.0
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 3.7e-19 98.2 88 67.0
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 6.3e-19 97.4 61 78.7
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 1.1e-18 96.7 108 56.5
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 1.4e-18 96.3 88 65.9
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 1.4e-18 96.3 86 57.0
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 1.8e-18 95.9 88 65.9
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 2.4e-18 95.5 88 63.6
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 3.1e-18 95.1 86 58.1
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 3.1e-18 95.1 92 58.7
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 4.1e-18 94.7 61 70.5
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 4.1e-18 94.7 61 70.5
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 5.3e-18 94.4 86 66.3
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 5.3e-18 94.4 86 66.3
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 5.3e-18 94.4 88 62.5
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 7.0e-18 94.0 92 57.6
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 7.0e-18 94.0 56 76.8
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 1.6e-17 92.8 86 65.1
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 3.5e-17 91.7 88 63.6
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 5.9e-17 90.9 57 73.7
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 1.0e-16 90.1 93 57.0
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 1.3e-16 89.7 88 55.7
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 5.0e-16 87.8 88 64.8
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 1.5e-15 86.3 90 51.1
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 1.5e-15 86.3 57 71.9
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 1.9e-15 85.9 91 47.3
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 4.2e-15 84.7 92 53.3
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 4.2e-15 84.7 57 70.2
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 5.5e-15 84.3 124 45.2
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 5.5e-15 84.3 61 67.2
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 9.4e-15 83.6 53 73.6
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 1.2e-14 83.2 50 76.0
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 1.6e-14 82.8 52 71.2
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 1.6e-14 82.8 86 50.0
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 2.7e-14 82.0 56 66.1
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 4.7e-14 81.3 67 64.2
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 6.1e-14 80.9 60 65.0
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 6.1e-14 80.9 106 58.5
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 8.0e-14 80.5 59 72.9
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 3.0e-13 78.6 82 48.8
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 5.7e-12 74.3 50 72.0
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 2.8e-11 72.0 42 76.2
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 8.3e-11 70.5 54 59.3
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 3.5e-09 65.1 53 58.5
COL.COLO4_16968 Corchorus olitorius HOM05D007450 ORTHO05D009377 1.7e-08 62.8 32 87.5


User provided reference genes

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