Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 3.6e-67 258.1 126 100.0
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 7.0e-63 243.8 126 94.4
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 3.0e-58 228.4 127 90.6
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 9.8e-57 223.4 127 87.4
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 9.2e-47 190.3 128 73.4
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 1.0e-45 186.8 126 73.0
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.0e-45 186.8 126 73.0
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 1.7e-45 186.0 124 73.4
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 2.3e-45 185.7 124 75.8
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 3.9e-45 184.9 126 72.2
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 6.6e-45 184.1 127 75.6
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 1.1e-44 183.3 124 74.2
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 1.5e-44 183.0 131 74.0
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 1.9e-44 182.6 128 71.9
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.5e-44 182.2 126 71.4
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 2.5e-44 182.2 126 72.2
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 7.3e-44 180.6 128 71.1
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 9.5e-44 180.3 125 72.0
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 2.8e-43 178.7 125 71.2
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 1.8e-42 176.0 126 70.6
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 2.3e-42 175.6 130 70.0
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 6.8e-42 174.1 119 73.1
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 1.2e-41 173.3 127 66.9
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 2.0e-41 172.6 127 71.7
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 7.5e-41 170.6 126 73.0
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 1.3e-40 169.9 129 70.5
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 1.7e-40 169.5 134 67.9
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 2.9e-40 168.7 126 67.5
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.1e-39 166.8 124 67.7
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 1.1e-39 166.8 124 64.5
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 1.1e-39 166.8 126 67.5
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.9e-39 166.0 124 67.7
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 3.2e-39 165.2 126 67.5
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 4.1e-39 164.9 124 67.7
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 9.2e-39 163.7 127 65.4
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 9.2e-39 163.7 126 66.7
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 1.2e-38 163.3 124 66.9
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 1.6e-38 162.9 125 68.0
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 2.7e-38 162.2 125 64.8
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 2.7e-38 162.2 125 64.8
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.7e-38 162.2 124 67.7
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 6.0e-38 161.0 126 66.7
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 3.9e-37 158.3 126 64.3
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 5.1e-37 157.9 135 62.2
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 5.1e-37 157.9 124 66.1
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 6.6e-37 157.5 125 66.4
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 2.5e-36 155.6 130 62.3
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 3.3e-36 155.2 130 62.3
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 3.3e-36 155.2 131 64.9
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 7.3e-36 154.1 133 58.6
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 9.5e-36 153.7 126 63.5
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 2.8e-35 152.1 134 61.2
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 1.1e-34 150.2 125 63.2
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 1.8e-34 149.4 129 62.8
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 2.3e-34 149.1 131 59.5
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 4.0e-34 148.3 128 60.9
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 4.0e-34 148.3 133 57.1
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 5.2e-34 147.9 124 64.5
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 5.2e-34 147.9 124 64.5
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 6.8e-34 147.5 133 57.1
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.2e-33 146.7 124 63.7
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 4.4e-33 144.8 129 62.0
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 7.6e-33 144.1 120 60.8
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 7.6e-33 144.1 126 58.7
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 9.9e-33 143.7 130 56.2
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 2.2e-32 142.5 129 62.0
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.2e-32 142.5 127 58.3
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 2.9e-32 142.1 134 58.2
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 6.4e-32 141.0 125 62.4
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 6.4e-32 141.0 128 57.0
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 7.1e-31 137.5 130 56.9
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 2.1e-30 136.0 126 58.7
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 2.7e-30 135.6 117 59.8
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 2.7e-30 135.6 135 56.3
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 7.8e-30 134.0 129 52.7
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 1.3e-29 133.3 110 61.8
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 1.7e-29 132.9 136 54.4
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 5.1e-29 131.3 128 53.9
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.1e-28 130.2 125 57.6
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 4.3e-28 128.3 136 51.5
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 4.3e-28 128.3 125 53.6
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 3.6e-27 125.2 124 56.5
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 3.6e-27 125.2 137 49.6
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 1.8e-26 122.9 125 56.0
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 1.2e-25 120.2 129 53.5
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 1.2e-25 120.2 129 53.5
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 2.6e-25 119.0 129 52.7
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 2.6e-25 119.0 129 52.7
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 2.6e-25 119.0 129 52.7
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 2.6e-25 119.0 129 52.7
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 2.6e-25 119.0 129 52.7
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 2.6e-25 119.0 129 52.7
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.6e-25 119.0 100 60.0
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 5.8e-25 117.9 130 53.8
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 5.8e-25 117.9 129 52.7
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 1.7e-24 116.3 116 51.7
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 2.2e-24 115.9 129 50.4
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 2.2e-24 115.9 141 48.9
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 3.8e-24 115.2 129 48.8
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 3.8e-24 115.2 129 49.6
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 3.8e-24 115.2 121 52.1
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 4.9e-24 114.8 129 48.8
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 6.4e-24 114.4 129 49.6
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 6.4e-24 114.4 129 49.6
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 2.4e-23 112.5 130 51.5
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 4.2e-23 111.7 70 74.3
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 5.4e-23 111.3 129 48.8
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 5.4e-23 111.3 129 48.8
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 1.6e-22 109.8 127 48.8
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 6.0e-22 107.8 131 48.9
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 6.0e-22 107.8 126 52.4
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 2.3e-21 105.9 110 55.5
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 5.1e-21 104.8 92 57.6
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 3.3e-20 102.1 117 52.1
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 5.6e-20 101.3 135 42.2
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 2.1e-19 99.4 116 51.7
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 3.4e-17 92.0 116 50.0
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 9.9e-17 90.5 119 41.2
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 7.1e-15 84.3 100 49.0
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.1e-12 77.0 125 44.0
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 9.0e-10 67.4 90 43.3
Pp3c1_8870 Physcomitrium patens HOM05D006772 ORTHO05D008367 6.0e-06 54.7 121 30.6


User provided reference genes

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