Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.3e-128 463.0 231 100.0
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 4.8e-118 427.9 231 93.9
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.4e-101 373.2 235 79.6
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.0e-91 340.5 213 77.5
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 1.3e-91 340.1 261 68.2
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 5.2e-88 328.2 227 71.4
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 6.8e-88 327.8 233 70.4
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 1.2e-87 327.0 238 70.6
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.5e-87 326.6 227 70.9
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 2.6e-87 325.9 240 68.3
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 5.7e-87 324.7 232 71.6
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 9.8e-87 323.9 225 72.4
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 9.8e-87 323.9 219 73.1
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 9.8e-87 323.9 219 74.0
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 1.7e-86 323.2 240 68.8
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 4.8e-86 321.6 229 71.6
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.4e-85 320.1 235 70.2
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 1.8e-85 319.7 209 75.1
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 3.1e-85 318.9 225 71.1
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 4.1e-85 318.5 245 67.3
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 7.0e-85 317.8 210 74.3
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 9.1e-85 317.4 216 72.2
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 2.7e-84 315.8 211 70.1
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 4.5e-84 315.1 216 71.3
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 4.5e-84 315.1 211 73.0
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 4.5e-84 315.1 212 69.8
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 4.5e-84 315.1 233 69.5
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 5.9e-84 314.7 233 68.7
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 1.0e-83 313.9 233 67.4
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 1.3e-83 313.5 185 82.2
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 1.7e-83 313.2 241 66.8
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.7e-83 313.2 232 69.8
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 2.3e-83 312.8 235 66.4
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 2.3e-83 312.8 209 73.7
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.3e-83 312.8 213 72.3
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 6.5e-83 311.2 224 68.8
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 6.5e-83 311.2 209 73.7
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 8.6e-83 310.8 217 71.0
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 3.3e-82 308.9 232 69.4
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 3.3e-82 308.9 215 73.0
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 5.5e-82 308.1 235 65.1
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 2.1e-81 306.2 210 71.9
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 2.1e-81 306.2 218 71.1
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.1e-81 306.2 227 68.3
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 3.6e-81 305.4 228 66.2
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 4.7e-81 305.1 235 67.2
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 6.1e-81 304.7 234 66.7
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.0e-80 303.9 227 67.8
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 1.4e-80 303.5 210 71.9
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 1.4e-80 303.5 241 64.3
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 2.3e-80 302.8 219 66.2
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 2.3e-80 302.8 218 70.2
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 3.0e-80 302.4 215 70.2
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.0e-80 302.4 233 68.2
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 4.0e-80 302.0 233 67.0
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 5.2e-80 301.6 232 66.8
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 1.2e-79 300.4 211 69.2
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 1.2e-79 300.4 218 65.6
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.5e-79 300.1 227 67.4
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 1.5e-79 300.1 211 69.2
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 2.6e-79 299.3 219 66.2
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 3.4e-79 298.9 226 66.8
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.4e-79 298.5 233 67.0
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 7.5e-79 297.7 233 66.5
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 1.7e-78 296.6 215 68.8
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 6.3e-78 294.7 210 67.1
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 1.4e-77 293.5 215 66.0
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 3.1e-77 292.4 226 62.4
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 4.1e-77 292.0 218 63.8
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 5.9e-76 288.1 239 60.3
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 7.8e-76 287.7 233 64.4
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 1.7e-75 286.6 216 67.1
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 1.7e-75 286.6 219 65.8
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.7e-75 286.6 226 65.0
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 2.3e-75 286.2 212 63.7
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 2.9e-75 285.8 234 60.7
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 3.8e-75 285.4 211 64.9
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 6.6e-75 284.6 211 64.9
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 8.6e-75 284.3 244 63.1
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 9.5e-74 280.8 215 65.1
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 9.5e-74 280.8 214 66.8
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 4.7e-73 278.5 231 63.6
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 8.0e-73 277.7 234 59.0
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 1.4e-72 276.9 219 65.8
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 1.8e-72 276.6 230 62.2
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 2.3e-72 276.2 212 61.3
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 4.0e-72 275.4 212 61.3
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 4.0e-72 275.4 207 65.7
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 6.8e-72 274.6 220 64.1
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 8.9e-72 274.2 221 63.8
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 8.9e-72 274.2 221 63.8
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 8.9e-72 274.2 221 63.8
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 1.3e-70 270.4 189 67.2
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 1.7e-70 270.0 221 63.8
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 2.9e-70 269.2 231 63.2
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 1.4e-69 266.9 231 61.0
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 6.0e-68 261.5 217 58.5
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 1.3e-67 260.4 280 51.8
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 4.3e-66 255.4 212 59.0
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 4.4e-63 245.4 210 61.9
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 4.4e-63 245.4 143 77.6
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 3.7e-62 242.3 206 56.8
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 7.0e-61 238.0 153 74.5
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 4.3e-58 228.8 143 75.5
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 1.6e-57 226.9 143 74.8
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.7e-54 216.9 139 71.2
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.7e-54 215.7 143 73.4
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 1.0e-51 207.6 214 50.5
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 2.5e-50 203.0 213 51.2
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 1.0e-43 181.0 118 69.5
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 3.3e-42 176.0 115 72.2
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 2.2e-30 136.7 192 41.1
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 1.2e-15 87.8 178 30.3
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 2.5e-13 80.1 136 36.8
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.2e-09 67.0 54 63.0
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 3.4e-07 59.7 208 27.4


User provided reference genes

Program Settings