Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G089100 Populus trichocarpa HOM05D007785 ORTHO05D008997 9.3e-37 156.4 80 100.0
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 2.0e-26 122.1 79 82.3
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 2.2e-25 118.6 77 81.8
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 8.0e-12 73.6 71 59.2
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 1.8e-11 72.4 75 49.3
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 1.8e-11 72.4 77 54.5
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 4.0e-11 71.2 72 55.6
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 1.5e-10 69.3 79 51.9
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 1.5e-10 69.3 77 50.6
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 4.4e-10 67.8 77 51.9
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 9.7e-10 66.6 77 50.6
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 1.3e-09 66.2 75 46.7
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 2.8e-09 65.1 75 45.3
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 4.8e-09 64.3 75 50.7
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 6.3e-09 63.9 79 45.6
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 1.1e-08 63.2 77 49.4
Dinv28928 Davidia involucrata HOM05D007785 ORTHO05D008997 1.4e-08 62.8 71 53.5
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 1.4e-08 62.8 78 50.0
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 1.4e-08 62.8 77 45.5
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 3.1e-08 61.6 69 47.8
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 3.1e-08 61.6 78 48.7
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 4.1e-08 61.2 69 44.9
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 9.1e-08 60.1 77 46.8
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 9.1e-08 60.1 80 43.8
Glyma.01G199900 Glycine max HOM05D007785 ORTHO05D008997 1.2e-07 59.7 72 48.6
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 1.2e-07 59.7 73 49.3
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 2.0e-07 58.9 77 45.5
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 2.0e-07 58.9 77 44.2
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 2.7e-07 58.5 73 46.6
Ciclev10033202m.g Citrus clementina HOM05D007785 ORTHO05D008997 3.5e-07 58.2 77 46.8
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 4.5e-07 57.8 77 42.9
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 5.9e-07 57.4 75 45.3
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 5.9e-07 57.4 75 41.3
Gohir.D08G179100 Gossypium hirsutum HOM05D012518 ORTHO05D008997 7.7e-07 57.0 65 49.2
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 7.7e-07 57.0 69 42.0
Gohir.A08G158700 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.0e-06 56.6 60 51.7
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.0e-06 56.6 73 45.2
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 1.3e-06 56.2 77 40.3
Gorai.004G187600 Gossypium raimondii HOM05D012518 ORTHO05D008997 1.7e-06 55.8 60 51.7
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 2.2e-06 55.5 75 41.3
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 2.9e-06 55.1 75 41.3
Glyma.11G042100 Glycine max HOM05D007785 ORTHO05D008997 3.8e-06 54.7 72 44.4
Prupe.5G041600 Prunus persica HOM05D024839 ORTHO05D025594 3.8e-06 54.7 79 43.0
Cc08_g02350 Coffea canephora HOM05D007785 ORTHO05D008997 5.0e-06 54.3 64 45.3
Lalb_Chr05g0214041 Lupinus albus HOM05D007785 ORTHO05D008997 5.0e-06 54.3 72 41.7
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 8.5e-06 53.5 72 44.4


User provided reference genes

Program Settings