Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 6.2e-200 700.7 374 100.0
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.2e-171 606.7 376 88.0
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 4.8e-168 594.7 415 82.2
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 1.8e-122 443.4 381 67.5
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 4.1e-119 432.2 376 71.3
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 3.1e-114 416.0 381 61.4
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 8.3e-112 407.9 377 60.7
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 1.6e-110 403.7 378 62.2
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 7.3e-108 394.8 381 61.4
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.6e-107 393.7 377 62.3
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 2.8e-107 392.9 377 59.4
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 2.8e-107 392.9 382 59.4
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 2.6e-105 386.3 352 60.8
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 1.7e-104 383.6 376 59.3
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 1.4e-103 380.6 382 58.4
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 7.1e-103 378.3 387 57.9
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.6e-102 377.1 345 61.2
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 3.5e-102 375.9 409 55.0
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 8.6e-101 371.3 395 55.9
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.1e-100 370.9 345 60.6
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 4.3e-100 369.0 383 56.9
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 7.3e-100 368.2 376 58.0
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 1.2e-99 367.5 435 52.2
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.6e-99 367.1 394 54.8
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.1e-99 366.7 338 61.8
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 2.1e-99 366.7 377 58.1
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 4.7e-99 365.5 301 72.8
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 2.4e-98 363.2 350 60.9
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.0e-97 360.1 401 54.1
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.6e-97 359.8 393 55.5
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.4e-97 359.4 393 55.2
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 3.8e-96 355.9 383 55.6
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 8.4e-96 354.8 378 56.9
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.2e-95 352.8 397 54.4
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 4.2e-95 352.4 348 57.8
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 7.1e-95 351.7 358 58.1
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 1.2e-94 350.9 384 53.4
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 7.8e-94 348.2 366 56.0
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 2.3e-93 346.7 377 56.2
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 2.3e-93 346.7 380 53.9
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 8.7e-93 344.7 404 54.0
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 1.5e-92 344.0 385 54.0
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 2.5e-92 343.2 382 55.0
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 7.3e-92 341.7 344 56.7
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 3.6e-91 339.3 344 55.5
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 3.6e-91 339.3 396 52.3
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.4e-90 337.4 344 55.8
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 2.0e-89 333.6 385 52.2
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 4.4e-89 332.4 383 52.2
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.4e-89 332.4 345 55.4
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 7.6e-89 331.6 384 52.6
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 9.9e-89 331.3 397 52.1
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.1e-87 327.8 384 52.9
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 1.1e-87 327.8 343 53.6
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 4.2e-87 325.9 364 52.7
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 7.1e-87 325.1 406 49.8
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 2.7e-86 323.2 368 53.0
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 6.0e-86 322.0 383 52.0
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 7.8e-86 321.6 430 47.7
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 3.9e-85 319.3 372 51.3
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 3.9e-85 319.3 372 51.3
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 2.5e-84 316.6 385 50.6
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 2.1e-83 313.5 369 50.9
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 2.4e-82 310.1 341 53.7
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 4.0e-82 309.3 374 50.0
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 9.9e-81 304.7 348 51.4
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.2e-78 297.7 377 49.6
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 1.6e-78 297.4 451 46.6
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 3.5e-78 296.2 374 50.3
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 4.6e-78 295.8 302 57.6
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 4.6e-78 295.8 377 50.1
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 7.9e-78 295.0 350 51.4
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 1.0e-77 294.7 384 47.9
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.0e-77 294.7 377 49.9
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 3.0e-77 293.1 371 49.6
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 8.7e-77 291.6 380 48.7
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 1.9e-76 290.4 370 49.5
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 3.3e-76 289.7 373 49.1
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 8.1e-75 285.0 371 48.5
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 1.4e-71 274.2 374 48.4
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 5.5e-71 272.3 317 51.1
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 2.7e-70 270.0 389 46.8
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 4.6e-70 269.2 372 47.0
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 7.9e-70 268.5 336 50.0
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 1.3e-69 267.7 379 46.7
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 2.5e-68 263.5 300 52.0
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 3.3e-68 263.1 390 44.4
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 8.2e-67 258.5 384 46.1
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 8.2e-67 258.5 384 46.1
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 1.1e-66 258.1 208 64.9
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 1.8e-66 257.3 378 45.2
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 1.8e-66 257.3 377 45.1
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 1.8e-66 257.3 374 46.5
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 1.2e-65 254.6 374 44.9
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 4.6e-62 242.7 376 45.5
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 7.9e-62 241.9 391 43.0
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 4.3e-60 236.1 341 43.1
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 1.3e-59 234.6 385 42.9
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 2.2e-59 233.8 272 54.0
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 4.8e-59 232.6 266 53.4
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 4.1e-58 229.6 396 42.7
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 8.5e-56 221.9 298 47.7
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 8.5e-56 221.9 298 47.7
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 8.5e-56 221.9 298 47.7
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 8.5e-56 221.9 309 48.5
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 4.2e-55 219.5 271 52.8
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 5.5e-55 219.2 368 42.1
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 1.4e-53 214.5 296 47.0
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 1.4e-53 214.5 296 47.0
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.8e-53 214.2 311 47.9
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.9e-53 213.0 383 43.1
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 6.7e-53 212.2 382 43.5
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 1.7e-51 207.6 388 38.9
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 1.4e-47 194.5 424 36.1
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 2.3e-45 187.2 354 36.7
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 4.8e-27 126.3 155 52.3
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 1.1e-23 115.2 338 30.8
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 6.1e-22 109.4 97 59.8
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 7.2e-15 85.9 370 25.7
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 1.6e-14 84.7 42 81.0
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 2.1e-14 84.3 291 28.9
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.0e-13 82.0 333 27.6
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 3.0e-13 80.5 87 54.0
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 7.5e-12 75.9 55 65.5
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 3.7e-11 73.6 218 29.4
Cpa.g.sc2.370 Carica papaya HOM05D005771 ORTHO05D007173 3.9e-08 63.5 55 65.5
Sabra01G0118300 Salix brachista HOM05D005771 ORTHO05D007173 1.5e-07 61.6 44 79.5
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 2.8e-06 57.4 394 21.8


User provided reference genes

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