Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 8.5e-158 560.5 317 100.0
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 2.7e-143 512.3 319 91.5
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 2.0e-98 363.2 324 65.1
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 7.6e-98 361.3 319 65.8
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 5.1e-94 348.6 317 67.8
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 5.6e-93 345.1 305 63.9
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 3.6e-92 342.4 309 64.4
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 2.4e-91 339.7 321 63.9
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 9.0e-91 337.8 308 63.3
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 1.5e-90 337.0 316 62.7
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 2.0e-90 336.7 306 63.1
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 2.0e-90 336.7 313 63.3
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 7.6e-90 334.7 329 60.8
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 9.9e-90 334.3 310 63.9
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.7e-89 333.6 306 62.7
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.9e-89 332.0 301 62.1
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.9e-88 330.1 309 62.8
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 2.4e-88 329.7 319 62.1
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 2.4e-88 329.7 317 59.9
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.4e-88 329.7 309 63.1
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 7.1e-88 328.2 313 62.0
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.8e-86 323.6 307 64.8
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 1.9e-85 320.1 257 69.3
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 3.6e-84 315.8 307 63.2
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 4.9e-81 305.4 308 59.7
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.9e-80 303.5 310 56.8
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 7.1e-80 301.6 321 60.7
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 4.6e-79 298.9 306 59.8
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 1.5e-77 293.9 309 55.3
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 3.3e-77 292.7 313 57.2
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 3.3e-77 292.7 291 61.9
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 2.1e-76 290.0 319 55.5
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 2.1e-76 290.0 309 58.9
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 3.1e-75 286.2 294 60.2
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 1.5e-74 283.9 294 59.5
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 2.0e-74 283.5 304 58.6
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 2.6e-74 283.1 318 54.4
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 4.5e-74 282.3 292 57.2
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 5.8e-74 282.0 307 56.7
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 1.0e-73 281.2 293 57.7
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 1.3e-73 280.8 312 56.7
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.7e-73 280.4 294 58.5
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 2.2e-73 280.0 299 58.9
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 4.2e-72 275.8 300 56.7
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 7.1e-72 275.0 292 60.6
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 2.3e-70 270.0 315 52.4
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 1.9e-69 266.9 304 57.6
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 4.3e-69 265.8 339 52.8
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 8.2e-68 261.5 295 57.3
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.1e-67 261.2 299 56.2
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 4.5e-66 255.8 290 57.9
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 5.9e-66 255.4 254 61.4
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.4e-64 250.8 325 51.4
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.9e-64 250.4 259 56.8
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 4.2e-64 249.2 313 53.0
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 4.2e-64 249.2 286 55.2
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 5.5e-64 248.8 235 62.6
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 2.7e-63 246.5 301 54.5
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 3.6e-63 246.1 271 57.9
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 4.6e-63 245.7 309 48.9
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.5e-61 240.7 259 53.3
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 1.9e-61 240.4 316 52.5
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 1.9e-61 240.4 316 52.5
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 3.1e-59 233.0 319 49.8
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 3.1e-59 233.0 255 55.7
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 2.2e-57 226.9 318 50.9
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 5.0e-57 225.7 320 49.7
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 5.0e-57 225.7 263 54.4
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 8.5e-57 224.9 291 51.2
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.9e-56 223.8 259 53.3
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 2.5e-56 223.4 291 51.9
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 2.1e-55 220.3 319 47.3
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 2.1e-55 220.3 322 47.5
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 2.7e-55 219.9 288 52.4
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 4.6e-55 219.2 319 48.9
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 1.0e-54 218.0 290 49.7
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 1.8e-54 217.2 318 47.2
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 1.8e-54 217.2 315 47.0
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 3.9e-54 216.1 320 47.5
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 1.1e-51 208.0 290 49.7
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 2.4e-51 206.8 270 47.8
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.5e-50 204.1 293 47.1
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 7.7e-50 201.8 286 44.1
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 3.8e-49 199.5 226 53.5
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 6.5e-49 198.7 243 52.7
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 1.9e-48 197.2 298 46.0
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 5.5e-48 195.7 234 50.0
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 2.1e-47 193.7 300 45.3
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 4.7e-47 192.6 266 48.5
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 1.8e-46 190.7 289 47.1
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 9.7e-45 184.9 260 50.0
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 1.7e-44 184.1 203 49.3
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 4.8e-44 182.6 214 49.5
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 8.2e-44 181.8 321 42.7
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 2.6e-42 176.8 258 48.8
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 2.2e-41 173.7 253 46.6
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 2.9e-41 173.3 192 49.0
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 5.0e-41 172.6 220 47.7
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 8.0e-39 165.2 305 43.6
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 4.4e-37 159.5 195 46.2
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 3.7e-36 156.4 223 51.1
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 5.3e-35 152.5 269 40.5
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 1.6e-26 124.4 267 36.7
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 9.5e-24 115.2 128 54.7
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 6.1e-23 112.5 79 74.7
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 5.4e-19 99.4 150 45.3
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 1.3e-17 94.7 246 34.6
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 1.9e-16 90.9 272 32.4
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 2.1e-15 87.4 256 35.9
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 4.7e-15 86.3 299 31.8
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 4.7e-15 86.3 250 35.6
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 2.0e-13 80.9 95 55.8
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 6.4e-12 75.9 74 54.1
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 1.2e-10 71.6 206 38.3
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 1.2e-10 71.6 290 33.1
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 5.0e-09 66.2 343 30.3
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 6.6e-09 65.9 232 31.5
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 9.5e-08 62.0 104 46.2
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 6.8e-06 55.8 295 27.8


User provided reference genes

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