Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G065900 Populus trichocarpa HOM05D008318 ORTHO05D010481 1.5e-65 252.7 129 100.0
Potri.001G168400 Populus trichocarpa HOM05D008318 ORTHO05D010481 7.9e-54 213.8 129 87.6
Sabra01G0142200 Salix brachista HOM05D008318 ORTHO05D010481 4.2e-47 191.4 120 85.0
QL05p004216 Quercus lobata HOM05D008318 ORTHO05D010481 3.7e-43 178.3 120 81.7
COL.COLO4_30750 Corchorus olitorius HOM05D008318 ORTHO05D010481 2.0e-41 172.6 121 75.2
CiPaw.02G135200 Carya illinoinensis HOM05D008318 ORTHO05D010481 5.9e-41 171.0 121 76.9
Haze_16036 Corylus avellana HOM05D008318 ORTHO05D010481 2.9e-40 168.7 112 81.2
Manes.11G019700 Manihot esculenta HOM05D008318 ORTHO05D010481 8.5e-40 167.2 135 73.3
Thecc.06G121000 Theobroma cacao HOM05D008318 ORTHO05D010481 1.1e-39 166.8 120 74.2
Dinv20430 Davidia involucrata HOM05D008318 ORTHO05D010481 1.8e-37 159.5 121 75.2
Cfa003529 Carpinus fangiana HOM05D008318 ORTHO05D010481 2.3e-37 159.1 122 70.5
Ciclev10026763m.g Citrus clementina HOM05D008318 ORTHO05D010481 2.0e-36 156.0 134 64.9
Glyma.07G039500 Glycine max HOM05D008318 ORTHO05D010481 5.7e-36 154.5 130 71.5
Lj3g0007896 Lotus japonicus HOM05D008318 ORTHO05D010481 5.7e-36 154.5 129 67.4
Eucgr.J02810 Eucalyptus grandis HOM05D008318 ORTHO05D010481 2.2e-35 152.5 121 67.8
TAR383G0433 Trochodendron aralioides HOM05D008318 ORTHO05D010481 6.3e-35 151.0 126 68.3
Hma1.2p1_0291F.1_g115060 Hydrangea macrophylla HOM05D008318 ORTHO05D010481 8.3e-35 150.6 129 68.2
Prupe.3G039900 Prunus persica HOM05D008318 ORTHO05D010481 8.3e-35 150.6 121 67.8
Rhsim12G0209900 Rhododendron simsii HOM05D008318 ORTHO05D010481 8.3e-35 150.6 127 68.5
RcHm_v2.0_Chr2g0145711 Rosa chinensis HOM05D008318 ORTHO05D010481 2.4e-34 149.1 134 69.4
FvH4_6g34840 Fragaria vesca HOM05D008318 ORTHO05D010481 7.0e-34 147.5 134 67.2
MD09G1181800 Malus domestica HOM05D008318 ORTHO05D010481 7.0e-34 147.5 137 62.8
Nn8g38638 Nelumbo nucifera HOM05D008318 ORTHO05D010481 1.6e-33 146.4 122 63.1
Ca_23388_v3 Cicer arietinum L. HOM05D008318 ORTHO05D010481 3.5e-33 145.2 129 64.3
Gohir.A06G144300 Gossypium hirsutum HOM05D008318 ORTHO05D010481 7.7e-33 144.1 116 67.2
Oeu011091.1 Olea europaea HOM05D008318 ORTHO05D010481 7.7e-33 144.1 129 64.3
Ah.08g216830 Amaranthus hybridus HOM05D008318 ORTHO05D010481 1.7e-32 142.9 122 62.3
Gohir.D06G150000 Gossypium hirsutum HOM05D008318 ORTHO05D010481 6.5e-32 141.0 118 66.9
Gorai.010G175100 Gossypium raimondii HOM05D008318 ORTHO05D010481 6.5e-32 141.0 116 65.5
Lalb_Chr25g0281471 Lupinus albus HOM05D008318 ORTHO05D010481 8.6e-32 140.6 129 62.8
Nitab4.5_0007255g0050 Nicotiana tabacum HOM05D008318 ORTHO05D010481 1.5e-31 139.8 127 60.6
ClCG07G014110 Citrullus lanatus HOM05D008318 ORTHO05D010481 7.2e-31 137.5 120 65.8
FAN14G5086 Fragaria x ananassa HOM05D008318 ORTHO05D010481 1.2e-30 136.7 115 69.6
CsaV3_UNG227960 Cucumis sativus L. HOM05D008318 ORTHO05D010481 1.6e-30 136.3 123 61.8
Sc15g0000380 Simmondsia chinensis HOM05D008318 ORTHO05D010481 1.6e-30 136.3 121 63.6
Psat4g174720 Pisum sativum HOM05D008318 ORTHO05D010481 2.1e-30 136.0 126 66.7
Actinidia27735 Actinidia chinensis HOM05D008318 ORTHO05D010481 3.6e-30 135.2 103 73.8
Medtr8g020870 Medicago truncatula HOM05D008318 ORTHO05D010481 3.6e-30 135.2 130 62.3
FAN09G4084 Fragaria x ananassa HOM05D008318 ORTHO05D010481 4.7e-30 134.8 116 69.0
Actinidia26824 Actinidia chinensis HOM05D008318 ORTHO05D010481 1.4e-29 133.3 103 72.8
Oeu000415.1 Olea europaea HOM05D008318 ORTHO05D010481 3.0e-29 132.1 109 65.1
Aqoxy1G00205 Aquilegia oxysepala HOM05D008318 ORTHO05D010481 4.0e-29 131.7 131 62.6
TPR.G36619 Trifolium pratense HOM05D008318 ORTHO05D010481 4.0e-29 131.7 127 63.8
Sopen03g041160 Solanum pennellii HOM05D008318 ORTHO05D010481 5.2e-29 131.3 123 60.2
MELO3C025802.2 Cucumis melo HOM05D008318 ORTHO05D010481 6.8e-29 131.0 119 61.3
VMungo0331G0642 Vigna mungo HOM05D008318 ORTHO05D010481 1.2e-28 130.2 132 59.1
CAN.G668.44 Capsicum annuum HOM05D008318 ORTHO05D010481 1.5e-28 129.8 128 58.6
Solyc03g123380.1 Solanum lycopersicum HOM05D008318 ORTHO05D010481 2.6e-28 129.0 124 60.5
Atru.chr1.3996 Acer truncatum HOM05D008318 ORTHO05D010481 4.4e-28 128.3 123 64.2
Sed0008648 Sechium edule HOM05D008318 ORTHO05D010481 5.7e-28 127.9 124 59.7
PGSC0003DMG400014028 Solanum tuberosum HOM05D008318 ORTHO05D010481 2.4e-26 122.5 121 59.5
Phvul.010G129200 Phaseolus vulgaris HOM05D008318 ORTHO05D010481 1.0e-24 117.1 130 53.1
Dinv37865 Davidia involucrata HOM05D004222 ORTHO05D004982 3.8e-24 115.2 107 61.7
DCAR_026413 Daucus carota HOM05D008318 ORTHO05D010481 6.6e-24 114.4 132 50.8
MSTRG.10951 Avicennia marina HOM05D008318 ORTHO05D010481 1.0e-21 107.1 124 52.4
Actinidia25326 Actinidia chinensis HOM05D008318 ORTHO05D010481 1.8e-21 106.3 93 65.6
Lsat_1_v5_gn_4_93140 Lactuca sativa HOM05D008318 ORTHO05D010481 2.6e-20 102.4 120 51.7
EL10Ac7g16416 Beta vulgaris HOM05D008318 ORTHO05D010481 3.4e-20 102.1 94 61.7
SGA_v2.0_scaffold71G23850 Striga asiatica HOM05D008318 ORTHO05D010481 3.7e-19 98.6 123 51.2
Aa31LG8G1250 Aethionema arabicum HOM05D008318 ORTHO05D010481 1.2e-17 93.6 121 44.6
Manes.04G145300 Manihot esculenta HOM05D008318 ORTHO05D010481 5.0e-16 88.2 70 68.6
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 6.2e-06 54.7 128 36.7


User provided reference genes

Program Settings