Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G065133 Populus trichocarpa HOM05D000388 ORTHO05D004227 8.0e-31 136.3 64 100.0
Migut.D01425 Erythranthe guttata HOM05D000388 ORTHO05D004227 2.3e-30 134.8 64 98.4
AL2G21390 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
BolSC29t60457H Brassica oleracea HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
BraA06t25429Z Brassica rapa HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
BraSC151t45710Z Brassica rapa HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
BraSC179t45799Z Brassica rapa HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
Ciclev10004110m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
Ciclev10010876m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
Ciclev10027655m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
Ciclev10030468m.g Citrus clementina HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
HanXRQChr16g0522541 Helianthus annuus HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
Lalb_Chr23g0274721 Lupinus albus HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
Prupe.1G271000 Prunus persica HOM05D000388 ORTHO05D004227 4.0e-30 134.0 64 98.4
C04p63050 Brassica napus HOM05D000388 ORTHO05D004227 1.2e-29 132.5 64 96.9
BolC7t41724H Brassica oleracea HOM05D000388 ORTHO05D004227 1.2e-29 132.5 61 100.0
Gohir.A10G100300 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.2e-29 132.5 64 96.9
BolSC47t61105H Brassica oleracea HOM05D000388 ORTHO05D004227 9.8e-29 129.4 64 95.3
Hund27844 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.8e-29 129.4 62 95.2
Hund31434 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.3e-28 129.0 63 93.7
LjContig00489g0010648 Lotus japonicus HOM05D000388 ORTHO05D004227 3.7e-28 127.5 58 100.0
Hund19306 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.7e-28 127.5 58 100.0
Solyc00g500058.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 4.9e-28 127.1 59 98.3
Solyc00g500210.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 4.9e-28 127.1 59 98.3
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 6.3e-28 126.7 59 98.3
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 8.3e-28 126.3 63 95.2
ATCG00360 Arabidopsis thaliana HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 1.1e-27 125.9 57 100.0
A06p23270 Brassica napus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
BNapus_Darmor_BZH_scaffold_253p00140 Brassica napus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
C09p29540 Brassica napus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
BolSC45t60867H Brassica oleracea HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
CARHR282020 Cardamine hirsuta HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Thhalv10011045m.g Eutrema salsugineum HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Glyma.09G178600 Glycine max HOM05D000388 ORTHO05D004227 1.1e-27 125.9 64 90.6
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
HanXRQChr11g0332831 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
HanXRQChr14g0430581 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 1.1e-27 125.9 57 100.0
Hma1.2p1_0248F.1_g102150 Hydrangea macrophylla HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Medtr4g051210 Medicago truncatula HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund08563 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund18038 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund19311 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund24075 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund27448 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund27566 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund27604 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund27660 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund27703 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund27748 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund27759 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund27801 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund27912 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28002 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28023 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28030 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28054 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28089 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28096 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28119 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28135 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28158 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28166 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28193 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28204 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28242 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28284 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28296 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28340 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28347 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28357 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28368 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28381 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28393 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28409 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28444 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28551 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28582 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28622 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28693 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund28727 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund29031 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund29057 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund29134 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund29411 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund29624 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund29675 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund29906 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund29948 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund30487 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund31284 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
Hund31288 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-27 125.9 57 100.0
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 1.1e-27 125.9 57 100.0
LjContig00318g0022419 Lotus japonicus HOM05D000388 ORTHO05D004227 1.4e-27 125.6 57 98.2
Sed0002050 Sechium edule HOM05D000388 ORTHO05D004227 1.4e-27 125.6 60 95.0
Sed0007112 Sechium edule HOM05D000388 ORTHO05D004227 1.4e-27 125.6 62 93.5
Sed0019997 Sechium edule HOM05D000388 ORTHO05D004227 1.4e-27 125.6 60 95.0
Hund15468 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.4e-27 125.6 58 98.3
CAN.G1693.3 Capsicum annuum HOM05D000388 ORTHO05D004227 1.8e-27 125.2 64 93.8
QL93p0270_0008 Quercus lobata HOM05D000388 ORTHO05D004227 3.1e-27 124.4 60 95.0
MELO3C027351.2 Cucumis melo HOM05D000388 ORTHO05D004227 4.1e-27 124.0 57 98.2
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 4.1e-27 124.0 56 100.0
BolSC49t61190H Brassica oleracea HOM05D000388 ORTHO05D004227 7.0e-27 123.2 65 93.8
Gohir.A07G163609 Gossypium hirsutum HOM05D000388 ORTHO05D004227 7.0e-27 123.2 64 93.8
EL10As20g24206 Beta vulgaris HOM05D000388 ORTHO05D004227 1.6e-26 122.1 57 96.5
Solyc00g500145.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.0e-25 119.4 57 94.7
BNapus_Darmor_BZH_scaffold_287p00050 Brassica napus HOM05D000388 ORTHO05D004227 1.7e-25 118.6 57 98.2
Lalb_Chr20g0115471 Lupinus albus HOM05D000388 ORTHO05D004227 8.6e-25 116.3 57 96.5
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 5.6e-24 113.6 53 98.1
Ciclev10027634m.g Citrus clementina HOM05D000388 ORTHO05D004227 7.3e-24 113.2 52 100.0
Ciclev10030462m.g Citrus clementina HOM05D000388 ORTHO05D004227 7.3e-24 113.2 52 100.0
arahy.Tifrunner.gnm1.ann1.9ACV62 Arachis hypogaea HOM05D000388 ORTHO05D004227 9.5e-24 112.8 64 87.5
arahy.Tifrunner.gnm1.ann1.HC26ZW Arachis hypogaea HOM05D000388 ORTHO05D004227 9.5e-24 112.8 64 87.5
EL10Ac1g01463 Beta vulgaris HOM05D000388 ORTHO05D004227 1.0e-22 109.4 54 94.4
Gohir.A06G120306 Gossypium hirsutum HOM05D000388 ORTHO05D004227 8.9e-22 106.3 52 96.2
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 8.9e-22 106.3 64 81.2
Glyma.01G201600 Glycine max HOM05D000388 ORTHO05D004227 2.2e-20 101.7 57 86.0
BraSC25t45839Z Brassica rapa HOM05D000388 ORTHO05D004227 2.9e-20 101.3 63 76.2
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 8.3e-20 99.8 59 76.3
GSVIVG01016018001 Vitis vinifera HOM05D000388 ORTHO05D004227 1.4e-19 99.0 45 100.0
Sed0002396 Sechium edule HOM05D000388 ORTHO05D004227 1.8e-19 98.6 48 93.8
Phvul.001G146500 Phaseolus vulgaris HOM05D000388 ORTHO05D004227 5.4e-19 97.1 57 80.7
BraSC140t45579Z Brassica rapa HOM05D000388 ORTHO05D004227 7.0e-19 96.7 48 91.7
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 1.2e-18 95.9 57 78.9
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 1.2e-18 95.9 57 78.9
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.2e-18 95.9 57 78.9
Lsat_1_v5_gn_8_5941 Lactuca sativa HOM05D000388 ORTHO05D004227 1.2e-18 95.9 47 93.6
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 1.2e-18 95.9 57 78.9
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 1.2e-18 95.9 57 78.9
BolSC29t60580H Brassica oleracea HOM05D000388 ORTHO05D004227 3.5e-18 94.4 43 100.0
BolSC45t60945H Brassica oleracea HOM05D000388 ORTHO05D004227 3.5e-18 94.4 43 100.0
Solyc05g016130.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 8.6e-17 89.7 44 90.9
Lalb_Chr15g0080681 Lupinus albus HOM05D000388 ORTHO05D004227 5.6e-16 87.0 40 100.0
Lsat_1_v5_gn_2_5581 Lactuca sativa HOM05D000388 ORTHO05D004227 2.1e-15 85.1 49 79.6
Gorai.011G148900 Gossypium raimondii HOM05D000388 ORTHO05D004227 2.8e-15 84.7 41 95.1
Nitab4.5_0010321g0020 Nicotiana tabacum HOM05D000388 ORTHO05D004227 6.2e-15 83.6 39 97.4
Sed0015902 Sechium edule HOM05D000388 ORTHO05D004227 1.4e-14 82.4 42 88.1
Solyc09g015280.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.4e-14 82.4 42 90.5
Gohir.D06G147066 Gossypium hirsutum HOM05D000388 ORTHO05D004227 3.1e-14 81.3 39 94.9
Gorai.010G171400 Gossypium raimondii HOM05D000388 ORTHO05D004227 3.1e-14 81.3 39 94.9
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 3.4e-13 77.8 35 100.0
Oeu062832.1 Olea europaea HOM05D000388 ORTHO05D004227 5.8e-13 77.0 55 70.9
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 1.7e-12 75.5 57 61.4
Migut.D01351 Erythranthe guttata HOM05D000388 ORTHO05D004227 8.3e-12 73.2 43 83.7
FAN07G1458 Fragaria x ananassa HOM05D000388 ORTHO05D004227 1.9e-11 72.0 37 86.5
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 9.2e-11 69.7 48 72.9
BolC9t56935H Brassica oleracea HOM05D000388 ORTHO05D004227 2.0e-10 68.6 31 100.0
CAN.G678.5 Capsicum annuum HOM05D000388 ORTHO05D004227 3.5e-10 67.8 35 94.3
RcHm_v2.0_Chr5g0077071 Rosa chinensis HOM05D000388 ORTHO05D004227 4.6e-10 67.4 49 67.3
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 6.0e-10 67.0 30 100.0
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 1.3e-09 65.9 57 59.6
RcHm_v2.0_Chr5g0077061 Rosa chinensis HOM05D000388 ORTHO05D004227 6.6e-09 63.5 35 82.9
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 4.7e-07 57.4 57 50.9
Eucgr.J00123 Eucalyptus grandis HOM05D000388 ORTHO05D004227 1.1e-06 56.2 27 92.6


User provided reference genes

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