Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G064900 Populus trichocarpa HOM05D008345 ORTHO05D010179 3.2e-31 139.0 168 100.0
Sabra03G0038200 Salix brachista HOM05D008345 ORTHO05D010179 1.2e-25 120.6 168 79.2
CANSAT56G1799 Cannabis sativa HOM05D008345 ORTHO05D010179 6.1e-14 81.6 46 80.4
FvH4_6g34720 Fragaria vesca HOM05D008345 ORTHO05D010179 1.8e-13 80.1 48 75.0
Glyma.07G038300 Glycine max HOM05D008345 ORTHO05D010179 1.8e-13 80.1 46 78.3
Ca_23374_v3 Cicer arietinum L. HOM05D008345 ORTHO05D010179 2.3e-13 79.7 46 76.1
Sabra01G0141900 Salix brachista HOM05D008345 ORTHO05D010179 2.3e-13 79.7 168 66.7
Glyma.16G007500 Glycine max HOM05D008345 ORTHO05D010179 3.0e-13 79.3 46 78.3
TWI79G1189 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 3.0e-13 79.3 49 71.4
Ciclev10026572m.g Citrus clementina HOM05D008345 ORTHO05D010179 4.0e-13 79.0 48 79.2
Prupe.3G041900 Prunus persica HOM05D008345 ORTHO05D010179 5.2e-13 78.6 46 78.3
Lj3g0003445 Lotus japonicus HOM05D008345 ORTHO05D010179 8.9e-13 77.8 46 76.1
Lj4g0027375 Lotus japonicus HOM05D008345 ORTHO05D010179 8.9e-13 77.8 46 76.1
COL.COLO4_30757 Corchorus olitorius HOM05D008345 ORTHO05D010179 1.2e-12 77.4 50 72.0
Manes.04G144600 Manihot esculenta HOM05D008345 ORTHO05D010179 1.2e-12 77.4 52 73.1
Thecc.06G120000 Theobroma cacao HOM05D008345 ORTHO05D010179 3.4e-12 75.9 50 68.0
Gohir.D05G142400 Gossypium hirsutum HOM05D008345 ORTHO05D010179 7.5e-12 74.7 50 66.0
FAN02G4084 Fragaria x ananassa HOM05D008345 ORTHO05D010179 9.8e-12 74.3 45 73.3
FAN05G3870 Fragaria x ananassa HOM05D008345 ORTHO05D010179 9.8e-12 74.3 45 73.3
FAN09G3851 Fragaria x ananassa HOM05D008345 ORTHO05D010179 1.3e-11 73.9 45 73.3
Medtr8g020530 Medicago truncatula HOM05D008345 ORTHO05D010179 1.3e-11 73.9 48 75.0
RcHm_v2.0_Chr2g0145371 Rosa chinensis HOM05D008345 ORTHO05D010179 1.3e-11 73.9 43 79.1
Gorai.009G146400 Gossypium raimondii HOM05D008345 ORTHO05D010179 2.2e-11 73.2 50 64.0
Duzib235G0194 Durio zibethinus HOM05D008345 ORTHO05D010179 3.7e-11 72.4 50 66.0
FAN14G1116 Fragaria x ananassa HOM05D008345 ORTHO05D010179 3.7e-11 72.4 45 73.3
Gohir.A05G140100 Gossypium hirsutum HOM05D008345 ORTHO05D010179 3.7e-11 72.4 50 64.0
Duzib192G0347 Durio zibethinus HOM05D008345 ORTHO05D010179 6.4e-11 71.6 50 62.0
PGR119G1016 Punica granatum HOM05D008345 ORTHO05D010179 6.4e-11 71.6 48 62.5
Lalb_Chr04g0263511 Lupinus albus HOM05D008345 ORTHO05D010179 1.1e-10 70.9 43 72.1
CiPaw.01G218600 Carya illinoinensis HOM05D008345 ORTHO05D010179 1.4e-10 70.5 44 79.5
TPR.G32503 Trifolium pratense HOM05D008345 ORTHO05D010179 1.8e-10 70.1 48 70.8
Cfa003533 Carpinus fangiana HOM05D008345 ORTHO05D010179 3.2e-10 69.3 40 80.0
Phvul.010G130100 Phaseolus vulgaris HOM05D008345 ORTHO05D010179 3.2e-10 69.3 46 73.9
MELO3C025805.2 Cucumis melo HOM05D008345 ORTHO05D010179 4.1e-10 68.9 49 63.3
ClCG07G014060 Citrullus lanatus HOM05D008345 ORTHO05D010179 7.0e-10 68.2 44 70.5
CsaV3_3G031340 Cucumis sativus L. HOM05D008345 ORTHO05D010179 9.2e-10 67.8 44 70.5
TWI31G0115 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 1.2e-09 67.4 44 70.5
VMungo0331G1836 Vigna mungo HOM05D008345 ORTHO05D010179 4.6e-09 65.5 46 67.4
Atru.chr1.3940 Acer truncatum HOM05D008345 ORTHO05D010179 7.8e-09 64.7 39 79.5
Cpa.g.sc25.117 Carica papaya HOM05D008345 ORTHO05D010179 7.8e-09 64.7 40 75.0
Duzib160G0403 Durio zibethinus HOM05D008345 ORTHO05D010179 7.8e-09 64.7 50 60.0
Lalb_Chr01g0013621 Lupinus albus HOM05D008345 ORTHO05D010179 3.0e-08 62.8 44 63.6
Potri.001G169200 Populus trichocarpa HOM05D008345 ORTHO05D010179 6.6e-08 61.6 155 78.7
QL05p007306 Quercus lobata HOM05D008345 ORTHO05D010179 8.6e-08 61.2 44 65.9
CiPaw.02G135800 Carya illinoinensis HOM05D008345 ORTHO05D010179 1.9e-07 60.1 35 82.9
Nn6g35611 Nelumbo nucifera HOM05D008345 ORTHO05D010179 1.9e-07 60.1 55 52.7
Aa31LG4G2900 Aethionema arabicum HOM05D013126 ORTHO05D015256 3.3e-07 59.3 43 62.8
Hma1.2p1_0291F.1_g115100 Hydrangea macrophylla HOM05D008345 ORTHO05D010179 5.6e-07 58.5 45 62.2
Sed0012336 Sechium edule HOM05D008345 ORTHO05D010179 5.6e-07 58.5 44 61.4
EL10Ac7g16409 Beta vulgaris HOM05D008345 ORTHO05D010179 9.5e-07 57.8 36 75.0
ATR0598G240 Amborella trichopoda HOM05D008345 ORTHO05D010179 1.2e-06 57.4 49 49.0
Sc12g0010590 Simmondsia chinensis HOM05D008345 ORTHO05D010179 1.2e-06 57.4 35 80.0
THA.LOC104810363 Tarenaya hassleriana HOM05D009071 ORTHO05D011247 2.1e-06 56.6 45 55.6
Nn8g38674 Nelumbo nucifera HOM05D042106 ORTHO05D010179 3.6e-06 55.8 41 58.5
Ah.15g094090 Amaranthus hybridus HOM05D008345 ORTHO05D010179 4.7e-06 55.5 44 70.5
Aa31LG8G1160 Aethionema arabicum HOM05D009071 ORTHO05D011247 6.2e-06 55.1 45 57.8


User provided reference genes

Program Settings