Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 6.4e-35 150.2 76 100.0
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 6.4e-27 123.6 67 92.5
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 4.6e-25 117.5 77 80.5
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 2.5e-23 111.7 78 74.4
Sabra03G0035500 Salix brachista HOM05D008383 ORTHO05D010186 5.8e-20 100.5 77 72.7
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 9.2e-18 93.2 77 66.2
Sabra02G0114800 Salix brachista HOM05D008383 ORTHO05D010186 1.2e-17 92.8 77 71.4
Sabra01G0138800 Salix brachista HOM05D008383 ORTHO05D010186 1.6e-17 92.4 77 66.2
Sabra02G0116400 Salix brachista HOM05D008383 ORTHO05D010186 7.8e-17 90.1 75 70.7
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.6e-15 84.0 76 51.3
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 3.6e-14 81.3 76 60.5
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 4.7e-14 80.9 76 60.5
Manes.11G030700 Manihot esculenta HOM05D008383 ORTHO05D010186 8.1e-14 80.1 77 62.3
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 1.1e-13 79.7 76 57.9
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 1.8e-13 79.0 70 61.4
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 3.1e-13 78.2 76 53.9
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 8.9e-13 76.6 71 53.5
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 1.2e-12 76.3 75 57.3
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 1.5e-12 75.9 75 56.0
Rhsim12G0203900 Rhododendron simsii HOM05D008383 ORTHO05D010186 2.0e-12 75.5 78 56.4
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 2.6e-12 75.1 73 54.8
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 2.6e-12 75.1 75 56.0
Rhsim12G0204000 Rhododendron simsii HOM05D008383 ORTHO05D010186 2.6e-12 75.1 78 55.1
DCAR_007598 Daucus carota HOM05D008383 ORTHO05D010186 1.3e-11 72.8 74 55.4
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 6.4e-11 70.5 76 57.9
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 6.4e-11 70.5 75 49.3
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 1.1e-10 69.7 76 56.6
Prupe.3G074000 Prunus persica HOM05D008383 ORTHO05D010186 1.1e-10 69.7 71 56.3
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 1.1e-10 69.7 72 50.0
CSS0040561 Camellia sinensis var. sinensis HOM05D008383 ORTHO05D010186 1.4e-10 69.3 69 53.6
FvH4_6g32710 Fragaria vesca HOM05D008383 ORTHO05D010186 1.4e-10 69.3 76 56.6
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 1.9e-10 68.9 79 50.6
Rhsim12G0204100 Rhododendron simsii HOM05D008383 ORTHO05D010186 2.4e-10 68.6 78 51.3
Nn8g38999 Nelumbo nucifera HOM05D008383 ORTHO05D010186 3.2e-10 68.2 76 48.7
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 5.4e-10 67.4 72 52.8
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 5.4e-10 67.4 66 47.0
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 7.1e-10 67.0 66 48.5
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 1.6e-09 65.9 76 53.9
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 2.1e-09 65.5 70 51.4
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 2.1e-09 65.5 77 45.5
TAR626G1700 Trochodendron aralioides HOM05D001398 ORTHO05D001467 2.1e-09 65.5 64 54.7
GSVIVG01016930001 Vitis vinifera HOM05D008383 ORTHO05D010186 1.7e-08 62.4 55 54.5
CiPaw.01G229000 Carya illinoinensis HOM05D008383 ORTHO05D010186 3.0e-08 61.6 75 44.0
CiPaw.01G229400 Carya illinoinensis HOM05D008383 ORTHO05D010186 3.0e-08 61.6 75 44.0
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.1e-08 60.8 61 52.5
Hma1.2p1_0764F.1_g215000 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 1.1e-07 59.7 78 50.0
GSVIVG01016932001 Vitis vinifera HOM05D008383 ORTHO05D010186 1.1e-07 59.7 50 52.0
AT1G51920 Arabidopsis thaliana HOM05D012542 ORTHO05D010186 1.5e-07 59.3 67 44.8
CANSAT56G2911 Cannabis sativa HOM05D008383 ORTHO05D010186 1.9e-07 58.9 72 51.4
AL1G59964 Arabidopsis lyrata HOM05D012542 ORTHO05D010186 2.5e-07 58.5 76 44.7
COL.COLO4_30544 Corchorus olitorius HOM05D008383 ORTHO05D010186 3.3e-07 58.2 71 45.1
TPR.G37221 Trifolium pratense HOM05D002271 ORTHO05D002346 3.3e-07 58.2 77 46.8
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 4.3e-07 57.8 73 42.5
Oeu026725.1 Olea europaea HOM05D008383 ORTHO05D010186 4.3e-07 57.8 69 46.4
MD09G1198900 Malus domestica HOM05D008383 ORTHO05D010186 5.6e-07 57.4 60 53.3
Dinv30419 Davidia involucrata HOM05D027392 ORTHO05D025251 1.6e-06 55.8 77 48.1
MD09G1199000 Malus domestica HOM05D008383 ORTHO05D010186 4.7e-06 54.3 80 48.8
Ciclev10026890m.g Citrus clementina HOM05D008383 ORTHO05D010186 8.1e-06 53.5 70 45.7


User provided reference genes

Program Settings