Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 2.9e-31 137.9 68 100.0
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 9.7e-27 122.9 67 92.5
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 9.4e-22 106.3 67 77.6
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 2.0e-19 98.6 69 73.9
Sabra02G0114800 Salix brachista HOM05D008383 ORTHO05D010186 7.0e-17 90.1 50 84.0
Sabra02G0116400 Salix brachista HOM05D008383 ORTHO05D010186 7.0e-17 90.1 50 84.0
Sabra03G0035500 Salix brachista HOM05D008383 ORTHO05D010186 1.2e-16 89.4 67 68.7
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 3.8e-15 84.3 67 62.7
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 4.2e-14 80.9 62 66.1
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 2.1e-13 78.6 71 59.2
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 4.7e-13 77.4 62 61.3
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 8.0e-13 76.6 62 61.3
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 8.0e-13 76.6 66 60.6
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.4e-12 75.9 66 50.0
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 1.4e-12 75.9 66 60.6
Sabra01G0138800 Salix brachista HOM05D008383 ORTHO05D010186 6.8e-12 73.6 68 58.8
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 1.2e-11 72.8 67 53.7
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 2.0e-11 72.0 66 57.6
Prupe.3G074000 Prunus persica HOM05D008383 ORTHO05D010186 2.6e-11 71.6 67 58.2
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 3.4e-11 71.2 63 52.4
CSS0040561 Camellia sinensis var. sinensis HOM05D008383 ORTHO05D010186 7.5e-11 70.1 66 56.1
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 9.8e-11 69.7 66 53.0
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 2.8e-10 68.2 61 57.4
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 2.8e-10 68.2 66 48.5
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 3.7e-10 67.8 67 47.8
GSVIVG01016930001 Vitis vinifera HOM05D008383 ORTHO05D010186 6.3e-10 67.0 53 58.5
TAR626G1700 Trochodendron aralioides HOM05D001398 ORTHO05D001467 8.3e-10 66.6 63 54.0
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 1.8e-09 65.5 70 51.4
Rhsim12G0203900 Rhododendron simsii HOM05D008383 ORTHO05D010186 2.4e-09 65.1 65 56.9
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 3.1e-09 64.7 62 51.6
Rhsim12G0204000 Rhododendron simsii HOM05D008383 ORTHO05D010186 3.1e-09 64.7 65 55.4
Rhsim12G0204100 Rhododendron simsii HOM05D008383 ORTHO05D010186 3.1e-09 64.7 78 48.7
Nn8g38999 Nelumbo nucifera HOM05D008383 ORTHO05D010186 7.0e-09 63.5 72 50.0
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 9.1e-09 63.2 63 50.8
TPR.G37221 Trifolium pratense HOM05D002271 ORTHO05D002346 9.1e-09 63.2 67 50.7
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 1.6e-08 62.4 66 54.5
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 2.7e-08 61.6 66 53.0
FvH4_6g32710 Fragaria vesca HOM05D008383 ORTHO05D010186 3.5e-08 61.2 66 53.0
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 5.9e-08 60.5 67 47.8
MD09G1198900 Malus domestica HOM05D008383 ORTHO05D010186 7.7e-08 60.1 59 52.5
DCAR_007598 Daucus carota HOM05D008383 ORTHO05D010186 1.0e-07 59.7 64 53.1
GSVIVG01016932001 Vitis vinifera HOM05D008383 ORTHO05D010186 1.7e-07 58.9 50 54.0
CANSAT56G2911 Cannabis sativa HOM05D008383 ORTHO05D010186 3.8e-07 57.8 62 54.8
Ciclev10026890m.g Citrus clementina HOM05D008383 ORTHO05D010186 3.8e-07 57.8 70 47.1
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 5.0e-07 57.4 51 54.9
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 6.6e-07 57.0 63 46.0
CiPaw.01G229000 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.5e-06 55.8 66 45.5
CiPaw.01G229400 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.5e-06 55.8 66 45.5
Dinv30419 Davidia involucrata HOM05D027392 ORTHO05D025251 1.5e-06 55.8 65 49.2
Hma1.2p1_0764F.1_g215000 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 1.9e-06 55.5 60 48.3
Carub.0001s4085 Capsella rubella HOM05D012542 ORTHO05D010186 2.5e-06 55.1 70 47.1
Manes.11G030700 Manihot esculenta HOM05D008383 ORTHO05D010186 2.5e-06 55.1 68 50.0
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 2.5e-06 55.1 62 50.0
MD09G1199000 Malus domestica HOM05D008383 ORTHO05D010186 7.2e-06 53.5 68 48.5


User provided reference genes

Program Settings