Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 8.6e-31 136.3 69 100.0
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.6e-21 105.5 69 84.1
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.4e-17 91.7 69 71.0
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 5.4e-17 90.5 67 68.7
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 1.2e-16 89.4 67 67.2
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 6.0e-16 87.0 67 67.2
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 7.8e-16 86.7 67 64.2
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.3e-15 85.9 67 65.7
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.3e-15 85.9 67 65.7
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.7e-15 85.5 67 65.7
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.7e-15 85.5 67 62.7
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 3.0e-15 84.7 67 64.2
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 5.1e-15 84.0 67 65.7
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 5.1e-15 84.0 67 65.7
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 8.7e-15 83.2 67 64.2
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 8.7e-15 83.2 69 65.2
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.1e-14 82.8 67 64.2
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 1.1e-14 82.8 67 59.7
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 1.1e-14 82.8 59 69.5
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 1.9e-14 82.0 67 62.7
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 5.6e-14 80.5 59 64.4
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 5.6e-14 80.5 67 62.7
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 5.6e-14 80.5 67 62.7
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 7.3e-14 80.1 58 67.2
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 7.3e-14 80.1 69 63.8
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 9.6e-14 79.7 67 61.2
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.3e-13 79.3 61 65.6
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.3e-13 79.3 67 59.7
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 1.3e-13 79.3 68 60.3
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 1.3e-13 79.3 67 59.7
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.1e-13 78.6 69 62.3
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 2.1e-13 78.6 67 59.7
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 2.8e-13 78.2 64 68.8
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 3.6e-13 77.8 67 56.7
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 3.6e-13 77.8 67 59.7
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 4.8e-13 77.4 68 58.8
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 4.8e-13 77.4 67 59.7
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 4.8e-13 77.4 69 58.0
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 6.2e-13 77.0 67 58.2
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 6.2e-13 77.0 64 62.5
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 8.1e-13 76.6 67 58.2
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 8.1e-13 76.6 67 58.2
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 8.1e-13 76.6 67 58.2
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.1e-12 76.3 68 57.4
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 1.1e-12 76.3 62 62.9
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 1.1e-12 76.3 64 60.9
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 1.4e-12 75.9 63 60.3
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 6.9e-12 73.6 68 57.4
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.2e-11 72.8 68 55.9
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 1.2e-11 72.8 68 54.4
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 1.5e-11 72.4 67 53.7
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 2.0e-11 72.0 64 60.9
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 2.6e-11 71.6 67 55.2
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 2.6e-11 71.6 67 55.2
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.7e-10 68.9 68 51.5
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 2.9e-10 68.2 62 56.5
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 2.9e-10 68.2 65 56.9
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 2.9e-10 68.2 64 57.8
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 3.8e-10 67.8 67 52.2
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 8.4e-10 66.6 61 60.7
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 1.4e-09 65.9 67 50.7
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 1.4e-09 65.9 61 54.1
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 1.4e-09 65.9 62 50.0
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 1.9e-09 65.5 65 49.2
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.9e-09 65.5 67 49.3
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 2.4e-09 65.1 67 52.2
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 3.2e-09 64.7 69 50.7
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 7.1e-09 63.5 67 49.3
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 9.3e-09 63.2 49 63.3
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 2.7e-08 61.6 65 58.5
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 4.6e-08 60.8 68 44.1
Thhalv10012203m.g Eutrema salsugineum HOM05D007950 ORTHO05D009951 6.0e-08 60.5 60 50.0
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 6.0e-08 60.5 64 50.0
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 7.9e-08 60.1 50 58.0
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 7.9e-08 60.1 64 50.0
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 5.1e-07 57.4 64 48.4
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 6.7e-07 57.0 62 46.8
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 5.6e-06 53.9 60 50.0


User provided reference genes

Program Settings