Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G052150 Populus trichocarpa HOM05D001777 ORTHO05D001809 2.2e-51 205.3 99 100.0
Potri.001G184800 Populus trichocarpa HOM05D001777 ORTHO05D001809 7.5e-20 100.5 153 41.8
Sabra01G0155300 Salix brachista HOM05D001777 ORTHO05D001809 6.4e-19 97.4 153 41.8
Sed0009271 Sechium edule HOM05D001777 ORTHO05D001809 6.6e-08 60.8 154 30.5
MELO3C024686.2 Cucumis melo HOM05D001777 ORTHO05D001809 2.5e-07 58.9 155 29.7
Manes.16G113800 Manihot esculenta HOM05D001777 ORTHO05D001809 2.5e-07 58.9 154 29.9
CSS0046187 Camellia sinensis var. sinensis HOM05D001777 ORTHO05D001809 3.3e-07 58.5 152 29.6
vmacro20720 Vaccinium macrocarpon HOM05D001777 ORTHO05D001809 3.3e-07 58.5 40 62.5
CANSAT02G0003 Cannabis sativa HOM05D001777 ORTHO05D001809 4.3e-07 58.2 154 29.2
Ciclev10007795m.g Citrus clementina HOM05D001777 ORTHO05D001809 4.3e-07 58.2 154 29.2
Potri.018G083000 Populus trichocarpa HOM05D001777 ORTHO05D001809 4.3e-07 58.2 154 28.6
Nitab4.5_0007626g0010 Nicotiana tabacum HOM05D001777 ORTHO05D001809 5.6e-07 57.8 41 61.0
Potri.006G160400 Populus trichocarpa HOM05D001777 ORTHO05D001809 5.6e-07 57.8 154 28.6
QL05p021596 Quercus lobata HOM05D001777 ORTHO05D001809 5.6e-07 57.8 148 29.1
Sabra06G0124100 Salix brachista HOM05D001777 ORTHO05D001809 5.6e-07 57.8 154 28.6
Sabra18G0070800 Salix brachista HOM05D001777 ORTHO05D001809 5.6e-07 57.8 154 28.6
MELO3C004566.2 Cucumis melo HOM05D001777 ORTHO05D001809 7.3e-07 57.4 155 28.4
Eucgr.C01266 Eucalyptus grandis HOM05D001777 ORTHO05D001809 7.3e-07 57.4 153 28.1
AL3G47970 Arabidopsis lyrata HOM05D001777 ORTHO05D001809 9.5e-07 57.0 153 26.8
ClCG06G008750 Citrullus lanatus HOM05D001777 ORTHO05D001809 9.5e-07 57.0 154 29.2
Nn3g18097 Nelumbo nucifera HOM05D001777 ORTHO05D001809 9.5e-07 57.0 154 29.2
THA.LOC104804023 Tarenaya hassleriana HOM05D001777 ORTHO05D001809 9.5e-07 57.0 77 39.0
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 9.5e-07 57.0 154 29.2
Rhsim03G0240100 Rhododendron simsii HOM05D001777 ORTHO05D001809 1.2e-06 56.6 144 27.8
GSVIVG01015363001 Vitis vinifera HOM05D001777 ORTHO05D001809 1.2e-06 56.6 156 27.6
Actinidia32674 Actinidia chinensis HOM05D001777 ORTHO05D001809 1.6e-06 56.2 77 39.0
Dinv41623 Davidia involucrata HOM05D001777 ORTHO05D001809 1.6e-06 56.2 156 27.6
Gohir.A07G005200 Gossypium hirsutum HOM05D001777 ORTHO05D001809 1.6e-06 56.2 154 27.9
Nitab4.5_0003733g0040 Nicotiana tabacum HOM05D001777 ORTHO05D001809 1.6e-06 56.2 154 28.6
Nitab4.5_0004391g0040 Nicotiana tabacum HOM05D001777 ORTHO05D001809 1.6e-06 56.2 154 28.6
Oeu018439.2 Olea europaea HOM05D001777 ORTHO05D001809 1.6e-06 56.2 147 27.9
Duzib150G0851 Durio zibethinus HOM05D001777 ORTHO05D001809 2.1e-06 55.8 154 27.9
Gohir.D10G069900 Gossypium hirsutum HOM05D001777 ORTHO05D001809 2.1e-06 55.8 41 58.5
Gorai.011G074200 Gossypium raimondii HOM05D001777 ORTHO05D001809 2.1e-06 55.8 41 58.5
Prupe.7G233800 Prunus persica HOM05D001777 ORTHO05D001809 2.1e-06 55.8 157 28.0
CiPaw.03G229200 Carya illinoinensis HOM05D001777 ORTHO05D001809 2.8e-06 55.5 154 28.6
QL02p045836 Quercus lobata HOM05D001777 ORTHO05D001809 2.8e-06 55.5 154 28.6
RcHm_v2.0_Chr2g0089991 Rosa chinensis HOM05D001777 ORTHO05D001809 2.8e-06 55.5 157 28.0
Sed0004736 Sechium edule HOM05D001777 ORTHO05D001809 2.8e-06 55.5 154 27.9
Sc08g0007640 Simmondsia chinensis HOM05D001777 ORTHO05D001809 2.8e-06 55.5 153 29.4
SGA_v2.0_scaffold129G34147 Striga asiatica HOM05D001777 ORTHO05D001809 2.8e-06 55.5 146 28.1
TWI34G0244 Tripterygium wilfordii HOM05D001777 ORTHO05D001809 2.8e-06 55.5 154 28.6
TAR636G1673 Trochodendron aralioides HOM05D001777 ORTHO05D001809 2.8e-06 55.5 154 28.6
MSTRG.19575 Avicennia marina HOM05D001777 ORTHO05D001809 3.6e-06 55.1 144 27.1
Cfa003236 Carpinus fangiana HOM05D001777 ORTHO05D001809 3.6e-06 55.1 154 28.6
ClCG11G002370 Citrullus lanatus HOM05D001777 ORTHO05D001809 3.6e-06 55.1 154 27.9
Haze_25770 Corylus avellana HOM05D001777 ORTHO05D001809 3.6e-06 55.1 154 28.6
CsaV3_2G002160 Cucumis sativus L. HOM05D001777 ORTHO05D001809 3.6e-06 55.1 154 27.9
Gohir.D07G006900 Gossypium hirsutum HOM05D001777 ORTHO05D001809 3.6e-06 55.1 154 27.3
Gorai.001G006500 Gossypium raimondii HOM05D001777 ORTHO05D001809 3.6e-06 55.1 154 27.3
Manes.03G023000 Manihot esculenta HOM05D001777 ORTHO05D001809 3.6e-06 55.1 154 27.9
Rhsim01G0100700 Rhododendron simsii HOM05D001777 ORTHO05D001809 3.6e-06 55.1 40 57.5
unitig_27.g24905 Utricularia gibba HOM05D001777 ORTHO05D001809 3.6e-06 55.1 33 66.7
Actinidia07406 Actinidia chinensis HOM05D001777 ORTHO05D001809 4.7e-06 54.7 40 57.5
Actinidia09430 Actinidia chinensis HOM05D001777 ORTHO05D001809 4.7e-06 54.7 154 28.6
CARHR236730 Cardamine hirsuta HOM05D001777 ORTHO05D001809 4.7e-06 54.7 77 39.0
Dinv36655 Davidia involucrata HOM05D001777 ORTHO05D001809 4.7e-06 54.7 40 57.5
PGR142G3402 Punica granatum HOM05D001777 ORTHO05D001809 4.7e-06 54.7 155 27.7
SGA_v2.0_scaffold19G08763 Striga asiatica HOM05D001777 ORTHO05D001809 4.7e-06 54.7 34 64.7
THA.LOC104814714 Tarenaya hassleriana HOM05D001777 ORTHO05D001809 4.7e-06 54.7 157 28.7
CiPaw.04G162700 Carya illinoinensis HOM05D001777 ORTHO05D001809 6.2e-06 54.3 154 27.9
CsaV3_1G045720 Cucumis sativus L. HOM05D001777 ORTHO05D001809 6.2e-06 54.3 154 28.6
Thhalv10024708m.g Eutrema salsugineum HOM05D001777 ORTHO05D001809 6.2e-06 54.3 77 39.0
Thecc.09G107200 Theobroma cacao HOM05D001777 ORTHO05D001809 6.2e-06 54.3 154 27.9
TWI63G1363 Tripterygium wilfordii HOM05D001777 ORTHO05D001809 6.2e-06 54.3 154 27.9
AT2G20110 Arabidopsis thaliana HOM05D001777 ORTHO05D001809 8.1e-06 53.9 153 25.5
MSTRG.6010 Avicennia marina HOM05D001777 ORTHO05D001809 8.1e-06 53.9 144 27.8
CSS0011206 Camellia sinensis var. sinensis HOM05D001777 ORTHO05D001809 8.1e-06 53.9 35 62.9
Carub.0006s2356 Capsella rubella HOM05D001777 ORTHO05D001809 8.1e-06 53.9 76 39.5
CAN.G1774.12 Capsicum annuum HOM05D001777 ORTHO05D001809 8.1e-06 53.9 144 27.1
CARHR110630 Cardamine hirsuta HOM05D001777 ORTHO05D001809 8.1e-06 53.9 153 26.1
Haze_16355 Corylus avellana HOM05D001777 ORTHO05D001809 8.1e-06 53.9 40 55.0
Dinv38017 Davidia involucrata HOM05D001777 ORTHO05D001809 8.1e-06 53.9 153 28.1
HanXRQChr06g0179211 Helianthus annuus HOM05D001777 ORTHO05D001809 8.1e-06 53.9 34 64.7
Hma1.2p1_1151F.1_g261960 Hydrangea macrophylla HOM05D001777 ORTHO05D001809 8.1e-06 53.9 154 27.9
Lalb_Chr16g0388091 Lupinus albus HOM05D001777 ORTHO05D001809 8.1e-06 53.9 40 57.5
Peaxi162Scf00231g00335 Petunia axillaris HOM05D001777 ORTHO05D001809 8.1e-06 53.9 156 27.6
Solyc12g007180.2 Solanum lycopersicum HOM05D001777 ORTHO05D001809 8.1e-06 53.9 144 27.1
Sopen12g003170 Solanum pennellii HOM05D001777 ORTHO05D001809 8.1e-06 53.9 144 27.1
PGSC0003DMG401000306 Solanum tuberosum HOM05D001777 ORTHO05D001809 8.1e-06 53.9 144 27.1


User provided reference genes

Program Settings