Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.7e-163 579.3 298 100.0
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 2.3e-157 558.9 298 93.0
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 9.5e-127 457.2 297 76.1
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 6.2e-126 454.5 268 83.2
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 6.2e-126 454.5 266 83.1
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 2.7e-121 439.1 286 77.6
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 1.7e-120 436.4 301 75.4
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 2.3e-120 436.0 270 80.0
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.0e-120 435.6 268 79.1
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 5.1e-120 434.9 269 80.3
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 5.1e-120 434.9 294 74.1
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.5e-119 433.3 268 78.7
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 2.5e-119 432.6 299 72.6
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 5.6e-119 431.4 290 76.2
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 7.3e-119 431.0 263 79.8
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.2e-118 430.3 318 70.8
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 1.6e-118 429.9 264 79.9
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 2.8e-118 429.1 270 77.4
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 6.2e-118 427.9 296 72.6
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 8.1e-118 427.6 269 77.3
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 8.1e-118 427.6 293 71.7
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 8.1e-118 427.6 292 75.0
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 4.0e-117 425.2 272 76.5
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 5.2e-117 424.9 267 78.7
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 6.8e-117 424.5 291 73.2
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 6.8e-117 424.5 253 80.2
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.5e-116 423.3 297 71.4
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 2.0e-116 422.9 270 78.1
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 5.8e-116 421.4 280 75.0
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 2.2e-115 419.5 253 79.4
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 6.4e-115 417.9 268 75.4
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 6.4e-115 417.9 272 75.4
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.9e-114 416.4 265 74.7
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 4.2e-114 415.2 284 71.1
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 4.2e-114 415.2 245 82.9
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 7.1e-114 414.5 269 74.0
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 9.3e-114 414.1 245 82.4
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 9.3e-114 414.1 243 83.1
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 9.3e-114 414.1 269 77.3
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 1.2e-113 413.7 297 69.0
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.6e-113 413.3 265 74.7
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 3.5e-113 412.1 245 80.4
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 3.5e-113 412.1 265 74.7
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 4.6e-113 411.8 296 72.0
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.0e-112 410.6 266 75.9
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.3e-112 409.5 284 72.5
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 2.3e-112 409.5 296 71.6
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 3.0e-112 409.1 285 70.9
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 8.7e-112 407.5 283 71.7
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 3.3e-111 405.6 273 73.3
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 5.6e-111 404.8 284 72.5
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 4.8e-110 401.7 273 72.5
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 8.1e-110 401.0 254 76.0
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.8e-109 399.8 277 71.8
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.8e-109 399.8 277 71.8
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 4.0e-109 398.7 262 73.7
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.5e-108 396.7 258 73.3
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 4.4e-108 395.2 263 74.1
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 4.4e-108 395.2 276 72.1
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 4.4e-108 395.2 276 72.1
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 4.4e-108 395.2 276 72.1
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 1.9e-106 389.8 228 81.6
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 2.3e-104 382.9 296 66.2
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.9e-104 382.1 263 73.8
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.1e-104 381.7 261 73.2
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 6.6e-104 381.3 273 70.7
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 2.6e-100 369.4 252 72.6
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 2.6e-100 369.4 246 75.6
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 2.4e-98 362.8 244 74.6
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 2.1e-97 359.8 264 67.8
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 6.0e-97 358.2 219 79.0
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 1.8e-96 356.7 219 78.1
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 6.7e-96 354.8 221 79.2
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 1.1e-95 354.0 326 56.1
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.5e-95 353.6 268 66.4
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 1.4e-93 347.1 222 75.7
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 4.9e-91 338.6 213 77.0
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 2.7e-89 332.8 228 68.9
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 6.0e-89 331.6 190 82.1
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 6.0e-89 331.6 257 63.8
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 7.9e-89 331.3 277 62.8
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 2.5e-87 326.2 205 75.1
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 1.2e-84 317.4 264 62.5
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.9e-82 310.1 302 56.6
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 9.3e-82 307.8 277 56.3
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 1.2e-81 307.4 208 75.0
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 6.7e-80 301.6 167 89.8
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 6.9e-77 291.6 207 69.6
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 6.9e-77 291.6 193 73.1
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.3e-75 287.3 249 55.4
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.5e-74 283.1 253 55.3
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.1e-73 280.0 208 69.7
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 2.3e-72 276.6 225 61.3
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 7.4e-71 271.6 246 53.7
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 4.5e-68 262.3 195 66.7
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 9.4e-66 254.6 221 60.6
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.7e-62 243.8 267 49.8
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 6.3e-62 241.9 180 64.4
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 8.2e-62 241.5 221 53.8
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 2.9e-51 206.5 174 62.1
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.6e-49 200.7 230 50.9
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 4.1e-37 159.5 92 84.8
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 4.7e-33 146.0 92 78.3
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 3.5e-28 129.8 109 57.8
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.1e-25 120.6 98 51.0
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 4.0e-24 116.3 91 65.9
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.3e-22 111.3 136 49.3
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 4.1e-21 106.3 56 85.7
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 7.0e-21 105.5 132 47.7
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 9.5e-18 95.1 69 58.0
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 4.7e-17 92.8 60 76.7
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 1.9e-13 80.9 216 29.2
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 7.1e-13 79.0 41 82.9
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 1.9e-10 70.9 51 64.7
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 7.3e-10 68.9 47 63.8
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 2.6e-07 60.5 32 93.8


User provided reference genes

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