Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G027933 Populus trichocarpa HOM05D000311 ORTHO05D050521 6.0e-86 320.9 167 100.0
Potri.005G008600 Populus trichocarpa HOM05D000311 ORTHO05D000183 2.2e-40 169.5 141 68.8
Potri.003G026308 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.1e-31 140.6 182 49.5
Potri.003G013700 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.4e-31 140.2 132 65.2
Potri.003G013200 Populus trichocarpa HOM05D000311 ORTHO05D000183 5.5e-31 138.3 132 63.6
Potri.003G026914 Populus trichocarpa HOM05D000311 ORTHO05D000183 4.4e-28 128.6 132 58.3
Potri.005G013800 Populus trichocarpa HOM05D000311 ORTHO05D000183 9.1e-26 120.9 133 53.4
Potri.005G007600 Populus trichocarpa HOM05D000311 ORTHO05D000183 6.3e-19 98.2 149 43.0
Potri.005G009300 Populus trichocarpa HOM05D000311 ORTHO05D000183 6.3e-19 98.2 126 52.4
Potri.005G006701 Populus trichocarpa HOM05D000311 ORTHO05D000183 5.3e-18 95.1 179 40.8
Potri.003G028557 Populus trichocarpa HOM05D000311 ORTHO05D000183 7.0e-18 94.7 219 35.6
Potri.005G008901 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.7e-16 90.1 130 46.2
Potri.005G013200 Populus trichocarpa HOM05D000311 ORTHO05D000183 2.1e-14 83.2 149 41.6
Potri.005G007900 Populus trichocarpa HOM05D000311 ORTHO05D000183 4.0e-13 79.0 194 33.5
vmacro21891 Vaccinium macrocarpon HOM05D000311 ORTHO05D000183 8.2e-11 71.2 138 39.1
Gohir.D05G010150 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.8e-10 70.1 153 37.9
Potri.005G013100 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.8e-10 70.1 139 38.8
TWI32G0156 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 4.1e-10 68.9 123 39.8
Potri.005G009700 Populus trichocarpa HOM05D000311 ORTHO05D000183 9.1e-10 67.8 194 31.4
Potri.009G069751 Populus trichocarpa HOM05D000311 ORTHO05D050521 2.7e-09 66.2 48 64.6
Gohir.D10G125000 Gossypium hirsutum HOM05D000311 ORTHO05D000183 3.5e-09 65.9 175 32.0
Gorai.011G138100 Gossypium raimondii HOM05D000311 ORTHO05D000183 3.5e-09 65.9 175 32.0
Actinidia26343 Actinidia chinensis HOM05D000311 ORTHO05D000183 4.5e-09 65.5 144 37.5
Gohir.A05G389900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 7.7e-09 64.7 176 31.2
Gohir.D08G053700 Gossypium hirsutum HOM05D000311 ORTHO05D000183 7.7e-09 64.7 172 32.6
Gorai.004G053700 Gossypium raimondii HOM05D000311 ORTHO05D000183 1.7e-08 63.5 176 30.7
Actinidia23545 Actinidia chinensis HOM05D000311 ORTHO05D000183 3.8e-08 62.4 131 35.1
Gohir.D10G124900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 3.8e-08 62.4 174 31.6
Gorai.009G010500 Gossypium raimondii HOM05D000311 ORTHO05D000183 3.8e-08 62.4 157 35.7
Gorai.011G138000 Gossypium raimondii HOM05D000311 ORTHO05D000183 5.0e-08 62.0 174 31.6
Sabra18G0119200 Salix brachista HOM05D000311 ORTHO05D000183 5.0e-08 62.0 149 35.6
Gohir.A10G141600 Gossypium hirsutum HOM05D000311 ORTHO05D000183 6.5e-08 61.6 174 31.6
Sopen11g005940 Solanum pennellii HOM05D000311 ORTHO05D000183 6.5e-08 61.6 167 34.7
Dinv41536 Davidia involucrata HOM05D000311 ORTHO05D000183 8.5e-08 61.2 190 33.7
TWI34G1669 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 8.5e-08 61.2 91 50.5
Actinidia02870 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.1e-07 60.8 144 34.0
Duzib212G0987 Durio zibethinus HOM05D000311 ORTHO05D000183 1.5e-07 60.5 141 33.3
Gohir.D10G225865 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.5e-07 60.5 118 36.4
Solyc11g011180.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 1.5e-07 60.5 167 34.7
Thecc.10G149900 Theobroma cacao HOM05D000311 ORTHO05D000183 1.5e-07 60.5 174 31.0
Eucgr.C04413 Eucalyptus grandis HOM05D000311 ORTHO05D000183 1.9e-07 60.1 155 34.8
Duzib150G0385 Durio zibethinus HOM05D000311 ORTHO05D000183 2.5e-07 59.7 77 50.6
Duzib212G0027 Durio zibethinus HOM05D000311 ORTHO05D000183 4.2e-07 58.9 161 29.8
Gohir.D02G027100 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.2e-06 57.4 122 34.4
TWI34G1219 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.2e-06 57.4 184 31.5
Duzib150G0699 Durio zibethinus HOM05D000311 ORTHO05D000183 1.6e-06 57.0 82 45.1
Glyma.07G143500 Glycine max HOM05D000311 ORTHO05D000183 1.6e-06 57.0 132 34.8
Gohir.A06G188432 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.6e-06 57.0 118 40.7
TWI14G0299 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.6e-06 57.0 147 34.0
CAN.G222.21 Capsicum annuum HOM05D000311 ORTHO05D000183 2.7e-06 56.2 167 32.3
Gohir.D06G196900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.7e-06 56.2 77 46.8
Nitab4.5_0009518g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 2.7e-06 56.2 168 30.4
Peaxi162Scf00305g01117 Petunia axillaris HOM05D000311 ORTHO05D000183 4.7e-06 55.5 149 33.6
TWI14G0374 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 4.7e-06 55.5 157 32.5
TWI34G0418 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 4.7e-06 55.5 188 29.8
Duzib150G0424 Durio zibethinus HOM05D000311 ORTHO05D000183 6.1e-06 55.1 74 44.6
Phvul.008G108500 Phaseolus vulgaris HOM05D000311 ORTHO05D000183 6.1e-06 55.1 123 33.3
VMungo0331G1986 Vigna mungo HOM05D000311 ORTHO05D000183 6.1e-06 55.1 188 30.3
Duzib212G1037 Durio zibethinus HOM05D000311 ORTHO05D000183 8.0e-06 54.7 123 33.3


User provided reference genes

Program Settings