Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 9.3e-74 280.0 133 100.0
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.2e-67 258.8 133 91.7
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.3e-64 248.8 132 89.4
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.3e-61 237.7 133 85.0
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.8e-59 231.5 133 85.0
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 6.5e-59 230.7 133 83.5
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 5.5e-58 227.6 134 82.8
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 5.1e-56 221.1 132 79.5
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 8.2e-54 213.8 130 80.0
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 2.9e-51 205.3 132 75.8
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 7.2e-50 200.7 134 74.6
Sabra03G0007000 Salix brachista HOM05D009888 ORTHO05D001895 2.1e-49 199.1 130 75.4
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 3.6e-49 198.4 132 77.3
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 2.0e-47 192.6 130 72.3
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 9.7e-39 163.7 133 59.4
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 1.3e-38 163.3 133 59.4
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 1.4e-37 159.8 133 59.4
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 4.2e-34 148.3 124 58.9
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 1.2e-28 130.2 133 51.1
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 1.3e-19 100.1 117 43.6
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.3e-16 89.4 127 38.6
Manes.07G020500 Manihot esculenta HOM05D016843 ORTHO05D001895 1.2e-15 87.0 123 38.2
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.0e-15 86.3 132 37.1
Manes.07G021000 Manihot esculenta HOM05D016843 ORTHO05D001895 3.4e-15 85.5 126 37.3
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 4.4e-15 85.1 125 36.0
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 5.7e-15 84.7 130 41.5
Manes.07G020550 Manihot esculenta HOM05D016843 ORTHO05D001895 9.8e-15 84.0 123 37.4
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-14 83.6 122 39.3
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-14 83.2 126 36.5
Manes.07G020700 Manihot esculenta HOM05D016843 ORTHO05D001895 6.3e-14 81.3 123 36.6
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.3e-14 80.9 92 41.3
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-13 80.5 127 34.6
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-13 80.5 122 36.9
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-13 80.1 121 38.0
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.1e-13 78.6 123 38.2
Manes.07G017350 Manihot esculenta HOM05D016843 ORTHO05D001895 5.4e-13 78.2 122 36.1
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.4e-13 78.2 93 43.0
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.4e-13 78.2 118 36.4
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.2e-13 77.4 127 33.9
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.2e-13 77.4 124 35.5
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-12 77.0 127 33.9
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-12 77.0 124 35.5
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.8e-12 74.3 107 34.6
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-11 73.6 116 34.5
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 1.3e-11 73.6 93 43.0
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.7e-11 73.2 107 38.3
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.7e-11 73.2 107 38.3
COL.COLO4_17180 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.3e-11 72.8 117 33.3
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-11 72.4 106 36.8
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 3.9e-11 72.0 121 38.8
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 5.0e-11 71.6 114 38.6
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.6e-11 71.2 92 39.1
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 6.6e-11 71.2 109 36.7
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 6.6e-11 71.2 109 36.7
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 8.6e-11 70.9 93 43.0
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-10 70.5 104 34.6
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-10 70.1 106 37.7
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.9e-10 69.7 109 33.9
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 2.5e-10 69.3 92 39.1
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 2.5e-10 69.3 92 39.1
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 3.3e-10 68.9 113 32.7
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-10 68.9 94 40.4
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 4.3e-10 68.6 109 36.7
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 4.3e-10 68.6 109 36.7
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.6e-10 68.2 95 37.9
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-10 68.2 109 35.8
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-10 68.2 126 32.5
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.3e-10 67.8 109 34.9
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 9.5e-10 67.4 109 35.8
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 9.5e-10 67.4 121 34.7
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-09 67.0 107 33.6
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.1e-09 66.2 116 31.9
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 2.8e-09 65.9 91 38.5
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 3.6e-09 65.5 92 38.0
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 3.6e-09 65.5 109 35.8
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 3.6e-09 65.5 92 38.0
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 3.6e-09 65.5 108 34.3
Manes.10G124912 Manihot esculenta HOM05D002599 ORTHO05D001895 4.7e-09 65.1 117 31.6
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.7e-09 65.1 113 31.9
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.1e-09 64.7 109 33.0
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.1e-09 64.7 116 31.9
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.1e-09 64.7 116 31.9
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 6.1e-09 64.7 92 38.0
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 1.4e-08 63.5 120 31.7
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 1.4e-08 63.5 117 30.8
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-08 63.2 91 37.4
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 2.3e-08 62.8 97 39.2
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.1e-08 62.4 90 40.0
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.0e-08 62.0 121 31.4
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 5.2e-08 61.6 113 35.4
Thecc.07G108200 Theobroma cacao HOM05D009888 ORTHO05D001895 1.5e-07 60.1 103 32.0
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 2.0e-07 59.7 110 35.5
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.0e-07 59.7 94 38.3
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 2.0e-07 59.7 83 37.3
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.4e-07 58.9 94 38.3
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 4.4e-07 58.5 118 33.1
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 4.4e-07 58.5 118 36.4
COL.COLO4_17753 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.8e-07 58.2 104 35.6
Gohir.D04G176033 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.8e-07 58.2 94 38.3
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 4.9e-06 55.1 121 30.6
Thecc.04G013200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.9e-06 55.1 119 32.8
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 6.4e-06 54.7 121 30.6
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 6.4e-06 54.7 121 30.6
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 6.4e-06 54.7 121 30.6


User provided reference genes

Program Settings