Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.6e-65 252.7 133 100.0
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.8e-61 239.2 132 86.4
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.0e-60 235.7 133 84.2
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.7e-59 232.6 133 85.0
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.8e-56 222.6 133 82.0
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.3e-55 218.4 133 80.5
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 5.7e-55 217.6 134 80.6
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 1.5e-52 209.5 134 85.8
Sabra03G0007000 Salix brachista HOM05D009888 ORTHO05D001895 2.0e-52 209.1 130 87.7
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 4.5e-52 208.0 132 84.1
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 1.0e-51 206.8 132 75.8
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 1.6e-49 199.5 130 76.2
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 3.0e-48 195.3 130 80.8
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 1.8e-45 186.0 132 72.7
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 6.5e-35 151.0 133 56.4
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 4.2e-34 148.3 133 55.6
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 7.5e-31 137.5 133 53.4
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 3.5e-28 128.6 124 53.2
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 4.5e-28 128.3 133 51.1
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 1.2e-15 87.0 94 45.7
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 6.3e-14 81.3 125 36.0
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.1e-13 78.6 126 34.9
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 4.1e-13 78.6 126 38.1
Manes.07G020500 Manihot esculenta HOM05D016843 ORTHO05D001895 1.2e-12 77.0 123 35.8
Manes.07G021000 Manihot esculenta HOM05D016843 ORTHO05D001895 2.0e-12 76.3 126 35.7
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 2.7e-12 75.9 126 36.5
Manes.07G020550 Manihot esculenta HOM05D016843 ORTHO05D001895 1.0e-11 73.9 123 35.0
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.7e-11 73.2 121 37.2
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-11 73.2 127 33.9
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.9e-11 72.4 141 33.3
Manes.07G020700 Manihot esculenta HOM05D016843 ORTHO05D001895 6.6e-11 71.2 92 38.0
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-10 70.1 127 31.5
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.9e-10 69.7 130 36.9
COL.COLO4_17180 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.3e-10 68.9 117 32.5
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.3e-10 68.9 119 33.6
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 3.3e-10 68.9 97 42.3
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 9.5e-10 67.4 125 32.0
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.2e-09 67.0 127 30.7
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-09 67.0 107 32.7
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-09 66.6 127 30.7
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 4.7e-09 65.1 98 39.8
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.0e-09 64.3 79 41.8
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.4e-08 63.5 116 31.9
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.4e-08 63.5 78 38.5
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-08 63.2 97 40.2
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-08 62.8 109 33.9
Manes.10G124912 Manihot esculenta HOM05D002599 ORTHO05D001895 4.0e-08 62.0 118 33.1
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 5.2e-08 61.6 96 36.5
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 6.8e-08 61.2 107 31.8
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 8.9e-08 60.8 118 29.7
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 8.9e-08 60.8 109 35.8
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-07 60.5 109 31.2
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-07 60.5 119 33.6
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 2.0e-07 59.7 106 33.0
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.4e-07 58.9 96 33.3
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.4e-07 58.5 116 30.2
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.4e-07 58.5 116 31.0
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.4e-07 58.5 116 31.0
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.8e-07 58.2 79 36.7
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 5.8e-07 58.2 92 34.8
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-06 56.6 78 37.2
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 1.7e-06 56.6 117 29.1
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.9e-06 55.8 108 30.6
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 2.9e-06 55.8 75 37.3
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 3.7e-06 55.5 91 34.1
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.9e-06 55.1 111 30.6
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.9e-06 55.1 125 28.0
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 6.4e-06 54.7 97 36.1
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.4e-06 54.7 111 29.7


User provided reference genes

Program Settings