Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.2e-74 281.2 133 100.0
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.2e-67 258.8 133 91.7
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 7.1e-66 253.8 132 89.4
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.7e-62 241.5 133 86.5
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.5e-60 234.6 133 84.2
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 4.5e-60 234.6 134 84.3
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.9e-60 234.2 133 84.2
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 1.0e-56 223.4 132 80.3
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 4.3e-55 218.0 130 80.8
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 1.5e-52 209.5 132 76.5
Sabra03G0007000 Salix brachista HOM05D009888 ORTHO05D001895 1.7e-51 206.1 130 76.9
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 1.4e-50 203.0 134 74.6
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 1.6e-49 199.5 132 76.5
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 1.0e-48 196.8 130 73.8
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 1.3e-38 163.3 133 60.2
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 6.3e-38 161.0 133 59.4
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 7.0e-37 157.5 133 59.4
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 3.2e-34 148.7 124 59.7
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 2.7e-28 129.0 133 51.9
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 1.2e-20 103.6 122 44.3
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.0e-16 90.5 132 39.4
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-16 90.1 127 39.4
Manes.07G020500 Manihot esculenta HOM05D016843 ORTHO05D001895 8.9e-16 87.4 123 38.2
Manes.07G021000 Manihot esculenta HOM05D016843 ORTHO05D001895 8.9e-16 87.4 126 38.1
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-15 86.3 130 40.8
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.4e-15 85.1 137 38.0
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.7e-15 84.7 118 36.4
Manes.07G020550 Manihot esculenta HOM05D016843 ORTHO05D001895 7.5e-15 84.3 123 37.4
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 7.5e-15 84.3 125 36.8
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-14 83.6 127 37.0
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-14 83.6 126 37.3
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-14 83.2 122 39.3
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.7e-14 82.0 124 41.1
Manes.07G020700 Manihot esculenta HOM05D016843 ORTHO05D001895 4.9e-14 81.6 123 35.8
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.9e-14 81.6 118 37.3
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.3e-14 80.9 117 36.8
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.3e-14 80.9 117 36.8
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.3e-14 80.9 117 36.8
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 8.3e-14 80.9 122 37.7
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.1e-13 80.5 118 36.4
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.1e-13 80.5 127 36.2
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-13 80.5 124 36.3
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.4e-13 80.1 127 36.2
Manes.07G017350 Manihot esculenta HOM05D016843 ORTHO05D001895 1.8e-13 79.7 122 36.1
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-13 79.3 118 34.7
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.1e-13 78.6 92 40.2
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.2e-12 77.0 93 41.9
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.5e-12 75.1 121 37.2
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 4.5e-12 75.1 93 44.1
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 7.8e-12 74.3 106 36.8
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-11 73.6 124 34.7
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.9e-11 72.0 93 37.6
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 3.9e-11 72.0 118 38.1
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 3.9e-11 72.0 106 36.8
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.0e-11 71.6 92 39.1
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 5.0e-11 71.6 94 43.6
Manes.10G124912 Manihot esculenta HOM05D002599 ORTHO05D001895 1.1e-10 70.5 117 33.3
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-10 70.5 105 34.3
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.5e-10 70.1 95 38.9
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-10 70.1 93 40.9
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.5e-10 69.3 116 32.8
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-10 68.9 93 41.9
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-10 68.9 109 35.8
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-10 68.9 109 35.8
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-10 68.2 92 39.1
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 7.3e-10 67.8 118 29.7
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 9.5e-10 67.4 119 36.1
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 2.1e-09 66.2 113 31.9
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 2.8e-09 65.9 115 28.7
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 2.8e-09 65.9 115 28.7
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 2.8e-09 65.9 114 35.1
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-09 65.9 113 31.9
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 2.8e-09 65.9 109 34.9
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 3.6e-09 65.5 100 33.0
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 4.7e-09 65.1 109 34.9
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.1e-09 64.7 125 31.2
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 6.1e-09 64.7 92 38.0
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 6.1e-09 64.7 92 38.0
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.0e-09 64.3 90 41.1
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-08 63.9 92 38.0
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-08 63.9 109 34.9
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-08 63.9 109 34.9
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-08 63.5 92 40.2
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-08 63.5 91 37.4
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.8e-08 63.2 121 31.4
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-08 62.8 109 33.9
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 3.1e-08 62.4 117 29.9
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 4.0e-08 62.0 118 35.6
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.0e-08 62.0 116 30.2
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.0e-08 62.0 116 31.0
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.0e-08 62.0 116 31.0
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 4.0e-08 62.0 91 37.4
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 5.2e-08 61.6 91 37.4
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 6.8e-08 61.2 119 30.3
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 2.0e-07 59.7 97 37.1
Thecc.07G108200 Theobroma cacao HOM05D009888 ORTHO05D001895 2.0e-07 59.7 116 29.3
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 2.6e-07 59.3 127 31.5
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 3.4e-07 58.9 127 31.5
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 3.4e-07 58.9 127 31.5
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 3.4e-07 58.9 127 31.5
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 4.4e-07 58.5 83 37.3
Sabra01G0164100 Salix brachista HOM05D002599 ORTHO05D001895 7.5e-07 57.8 119 31.1
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 1.7e-06 56.6 113 32.7
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 2.9e-06 55.8 110 34.5
Manes.07G021600 Manihot esculenta HOM05D002599 ORTHO05D001895 4.9e-06 55.1 116 29.3


User provided reference genes

Program Settings