Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.5e-71 272.7 130 100.0
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 7.7e-65 250.4 130 91.5
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 7.2e-63 243.8 132 87.9
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.6e-62 241.5 133 86.5
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 4.7e-62 241.1 134 86.6
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 4.0e-61 238.0 132 84.8
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.2e-61 237.7 133 85.0
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 1.8e-58 229.2 130 84.6
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.9e-56 221.9 133 82.0
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 6.6e-56 220.7 132 80.3
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 1.6e-54 216.1 134 79.1
Sabra03G0007000 Salix brachista HOM05D009888 ORTHO05D001895 2.1e-54 215.7 130 80.8
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 1.8e-53 212.6 132 80.3
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 2.6e-52 208.8 130 78.5
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 6.2e-38 161.0 131 58.8
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 1.4e-37 159.8 131 58.0
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 5.2e-37 157.9 131 60.3
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 1.6e-33 146.4 122 59.8
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 4.4e-28 128.3 131 51.9
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 3.4e-20 102.1 121 46.3
Manes.07G020500 Manihot esculenta HOM05D016843 ORTHO05D001895 3.2e-18 95.5 120 41.7
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.1e-17 92.8 125 40.8
Manes.07G020550 Manihot esculenta HOM05D016843 ORTHO05D001895 2.7e-17 92.4 120 40.8
Manes.07G021000 Manihot esculenta HOM05D016843 ORTHO05D001895 4.6e-17 91.7 123 39.8
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.0e-16 90.5 132 38.6
Manes.07G020700 Manihot esculenta HOM05D016843 ORTHO05D001895 6.6e-16 87.8 120 39.2
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 8.7e-16 87.4 128 42.2
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 4.3e-15 85.1 123 39.8
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.3e-15 84.3 114 38.6
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.3e-15 84.3 114 38.6
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.3e-15 84.3 114 38.6
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-14 82.4 122 37.7
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.8e-14 82.4 124 37.1
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.8e-14 81.6 136 37.5
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-14 81.6 125 41.6
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.2e-14 81.3 123 39.8
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.1e-14 80.9 126 36.5
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-13 80.5 115 37.4
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-13 80.1 117 39.3
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.0e-13 78.6 117 37.6
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.9e-13 77.8 126 35.7
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.0e-13 77.4 126 35.7
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 9.0e-13 77.4 90 41.1
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.6e-12 75.9 91 42.9
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-12 75.9 118 37.3
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.4e-12 75.5 119 39.5
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 4.4e-12 75.1 91 47.3
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 4.4e-12 75.1 106 41.5
Thecc.07G108500 Theobroma cacao HOM05D009888 ORTHO05D001895 5.8e-12 74.7 114 36.0
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.9e-12 73.9 115 34.8
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 9.9e-12 73.9 118 38.1
Manes.10G124912 Manihot esculenta HOM05D002599 ORTHO05D001895 1.3e-11 73.6 116 37.1
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-11 73.6 117 35.0
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.2e-11 72.8 93 40.9
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 3.8e-11 72.0 124 34.7
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.9e-11 71.6 105 35.2
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.4e-11 70.9 90 41.1
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-10 70.1 107 41.1
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-10 69.3 103 35.0
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 3.2e-10 68.9 115 32.2
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 4.2e-10 68.6 115 33.0
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 5.4e-10 68.2 104 35.6
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-09 67.0 107 36.4
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-09 67.0 107 36.4
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-09 67.0 99 40.4
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-09 66.6 115 32.2
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.6e-09 66.6 123 33.3
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 1.6e-09 66.6 90 40.0
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-09 66.2 109 37.6
Thecc.07G108200 Theobroma cacao HOM05D009888 ORTHO05D001895 2.1e-09 66.2 114 33.3
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.7e-09 65.9 115 32.2
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.7e-09 65.9 115 32.2
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 3.5e-09 65.5 98 37.8
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 7.8e-09 64.3 107 36.4
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 1.0e-08 63.9 117 33.3
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 1.3e-08 63.5 117 31.6
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-08 63.2 90 40.0
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-08 63.2 90 38.9
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-08 63.2 107 35.5
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-08 63.2 107 34.6
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-08 63.2 90 38.9
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-08 63.2 119 35.3
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-08 62.8 107 32.7
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-08 62.8 107 35.5
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-08 62.8 107 35.5
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 3.0e-08 62.4 90 38.9
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 3.0e-08 62.4 89 38.2
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 3.9e-08 62.0 88 33.0
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 3.9e-08 62.0 88 33.0
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 3.9e-08 62.0 91 36.3
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 5.1e-08 61.6 119 33.6
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 6.6e-08 61.2 119 33.6
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 6.6e-08 61.2 119 33.6
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 6.6e-08 61.2 119 33.6
Sabra01G0164100 Salix brachista HOM05D002599 ORTHO05D001895 8.7e-08 60.8 117 32.5
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-07 60.1 89 38.2
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.3e-07 58.9 110 32.7
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 4.3e-07 58.5 118 33.9
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.3e-07 58.5 107 33.6
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 7.3e-07 57.8 86 38.4
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 2.1e-06 56.2 112 34.8
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 2.1e-06 56.2 100 35.0
Prupe.1G574200 Prunus persica HOM05D002599 ORTHO05D001895 4.8e-06 55.1 117 31.6
Manes.07G021600 Manihot esculenta HOM05D002599 ORTHO05D001895 6.2e-06 54.7 119 29.4


User provided reference genes

Program Settings