Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G011000 Populus trichocarpa HOM05D016764 ORTHO05D001895 7.1e-59 230.3 111 100.0
Potri.003G010800 Populus trichocarpa HOM05D016764 ORTHO05D001895 1.0e-57 226.5 111 98.2
Sabra03G0006300 Salix brachista HOM05D016764 ORTHO05D001895 3.8e-44 181.4 102 83.3
Sabra03G0006200 Salix brachista HOM05D016764 ORTHO05D001895 7.3e-40 167.2 91 85.7
Potri.004G219600 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-38 162.5 105 71.4
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.5e-37 157.9 105 70.5
Sabra01G0166700 Salix brachista HOM05D016764 ORTHO05D001895 1.6e-31 139.4 104 65.4
Potri.004G220000 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.2e-31 137.5 103 61.2
Sabra01G0164300 Salix brachista HOM05D016764 ORTHO05D001895 6.2e-31 137.5 104 62.5
Potri.003G025350 Populus trichocarpa HOM05D016764 ORTHO05D001895 1.4e-22 109.8 88 67.0
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 1.5e-21 106.3 109 51.4
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.3e-20 103.2 102 52.0
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 6.5e-20 100.9 106 48.1
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.0e-14 80.5 102 43.1
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-13 78.2 107 38.3
Manes.07G021750 Manihot esculenta HOM05D016764 ORTHO05D001895 7.6e-13 77.4 66 51.5
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 7.6e-13 77.4 104 42.3
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 5.0e-12 74.7 102 35.3
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 6.5e-12 74.3 106 39.6
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.9e-11 72.8 104 34.6
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.5e-11 71.2 80 42.5
Gohir.A12G027233 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.2e-11 70.9 104 36.5
Gohir.A12G027266 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.2e-11 70.9 104 36.5
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.2e-11 70.9 102 34.3
Gorai.008G027000 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.2e-11 70.9 90 38.9
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 7.2e-11 70.9 97 34.0
Gohir.D12G026700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-10 69.7 111 33.3
Gohir.A12G027200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.7e-10 68.9 112 34.8
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.7e-10 68.9 102 35.3
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.7e-10 68.9 102 34.3
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-10 68.6 106 37.7
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 3.6e-10 68.6 105 34.3
Gohir.D12G026733 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.6e-10 68.2 104 35.6
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-09 66.6 110 39.1
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.4e-09 66.6 106 37.7
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.4e-09 66.6 106 37.7
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.4e-09 66.6 106 35.8
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-09 66.6 103 34.0
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-09 66.6 92 34.8
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-09 66.2 102 35.3
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-09 66.2 103 33.0
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.8e-09 66.2 107 38.3
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-09 65.9 102 36.3
Potri.004G218101 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-09 65.9 108 37.0
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.0e-09 65.5 110 38.2
Duzib052G0486 Durio zibethinus HOM05D002599 ORTHO05D001895 3.9e-09 65.1 108 32.4
Gohir.D04G176484 Gossypium hirsutum HOM05D002599 ORTHO05D029872 5.1e-09 64.7 111 33.3
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.1e-09 64.7 108 35.2
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 5.1e-09 64.7 104 36.5
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 5.1e-09 64.7 106 38.7
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 6.7e-09 64.3 102 35.3
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 8.8e-09 63.9 105 33.3
Atru.chr6.704 Acer truncatum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 81 39.5
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 1.5e-08 63.2 106 37.7
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.9e-08 62.8 90 37.8
Duzib052G1144 Durio zibethinus HOM05D002599 ORTHO05D001895 2.5e-08 62.4 111 33.3
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.5e-08 62.4 103 33.0
Duzib187G0682 Durio zibethinus HOM05D002599 ORTHO05D001895 4.3e-08 61.6 82 35.4
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.3e-08 61.6 106 35.8
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 5.7e-08 61.2 104 33.7
Gorai.012G168700 Gossypium raimondii HOM05D002599 ORTHO05D029872 7.4e-08 60.8 110 31.8
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.7e-08 60.5 104 31.7
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 9.7e-08 60.5 106 32.1
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-07 60.1 102 34.3
Sabra01G0165000 Salix brachista HOM05D002599 ORTHO05D001895 2.2e-07 59.3 102 33.3
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.8e-07 58.9 108 38.0
Gorai.012G169000 Gossypium raimondii HOM05D002599 ORTHO05D029872 2.8e-07 58.9 109 31.2
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.1e-06 57.0 87 40.2
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-06 56.6 88 35.2
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.4e-06 56.6 87 40.2
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-06 56.6 108 34.3
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-06 56.2 104 32.7
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 1.8e-06 56.2 74 37.8
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 4.1e-06 55.1 86 32.6
Thecc.05G107200 Theobroma cacao HOM05D002599 ORTHO05D025152 4.1e-06 55.1 118 36.4
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 4.1e-06 55.1 107 34.6
Manes.10G122700 Manihot esculenta HOM05D002599 ORTHO05D001895 5.3e-06 54.7 103 35.0
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.3e-06 54.7 93 32.3
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 6.9e-06 54.3 106 33.0
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 6.9e-06 54.3 92 32.6


User provided reference genes

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