Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.2e-39 166.0 81 100.0
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 3.1e-32 141.4 80 86.2
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 3.1e-32 141.4 80 85.0
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 7.0e-32 140.2 80 85.0
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 9.2e-32 139.8 80 85.0
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 9.2e-32 139.8 80 85.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 9.2e-32 139.8 80 85.0
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 1.2e-31 139.4 80 86.2
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 3.5e-31 137.9 80 83.8
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 4.5e-31 137.5 80 83.8
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 5.9e-31 137.1 80 83.8
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-30 136.0 80 82.5
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-30 136.0 80 82.5
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-30 136.0 80 82.5
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-30 136.0 80 82.5
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.3e-30 136.0 80 83.8
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.3e-30 136.0 80 83.8
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-30 134.8 79 83.5
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.9e-30 134.8 80 82.5
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.9e-30 134.8 80 82.5
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 2.9e-30 134.8 80 82.5
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 5.0e-30 134.0 80 83.8
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 6.6e-30 133.7 80 81.2
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 8.6e-30 133.3 81 84.0
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 8.6e-30 133.3 81 84.0
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 8.6e-30 133.3 81 84.0
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-29 132.9 80 78.8
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 1.5e-29 132.5 81 82.7
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.5e-29 132.5 81 80.2
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 2.5e-29 131.7 81 82.7
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 9.5e-29 129.8 80 78.8
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.2e-28 129.4 80 77.5
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 1.8e-27 125.6 70 87.1
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.3e-27 125.2 81 80.2
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 1.5e-26 122.5 73 80.8
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.5e-26 122.5 80 75.0
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 2.0e-26 122.1 71 83.1
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 5.7e-26 120.6 79 77.2
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.3e-25 119.4 81 72.8
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.7e-25 119.0 65 89.2
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 2.2e-25 118.6 80 77.5
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 6.4e-25 117.1 67 86.6
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 6.4e-25 117.1 81 74.1
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-24 115.9 66 86.4
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.8e-24 115.5 81 76.5
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 3.2e-24 114.8 71 78.9
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 3.2e-24 114.8 64 85.9
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 3.2e-24 114.8 64 85.9
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 3.2e-24 114.8 64 85.9
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 4.1e-24 114.4 80 72.5
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 5.4e-24 114.0 66 84.8
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 2.0e-23 112.1 64 85.9
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 2.0e-23 112.1 64 85.9
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 5.9e-23 110.5 80 70.0
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 7.8e-23 110.2 80 70.0
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 1.7e-22 109.0 66 81.8
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 1.7e-22 109.0 66 81.8
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 1.5e-21 105.9 81 69.1
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 9.5e-21 103.2 66 78.8
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 9.5e-21 103.2 77 68.8
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 8.0e-20 100.1 80 68.8
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 8.0e-20 100.1 80 67.5
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 1.1e-19 99.8 61 78.7
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 4.0e-19 97.8 61 80.3
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.0e-18 95.5 81 65.4
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 5.8e-18 94.0 54 81.5
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 9.8e-18 93.2 80 65.0
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 2.2e-17 92.0 93 60.2
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.2e-17 92.0 54 79.6
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.7e-17 91.3 54 79.6
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.9e-17 90.9 54 77.8
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.1e-16 89.7 54 75.9
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.1e-16 89.7 54 75.9
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 1.9e-16 89.0 54 77.8
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-15 86.3 80 61.2
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.2e-15 86.3 54 74.1
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.2e-15 86.3 54 74.1
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.2e-15 86.3 54 74.1
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-15 85.9 54 75.9
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 2.7e-15 85.1 54 77.8
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 3.5e-15 84.7 46 89.1
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 3.5e-15 84.7 47 89.4
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 4.6e-15 84.3 47 87.2
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 1.7e-14 82.4 48 85.4
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 5.0e-14 80.9 45 86.7
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 5.0e-14 80.9 54 74.1
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 1.1e-13 79.7 44 88.6
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 1.5e-13 79.3 40 92.5
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 1.5e-13 79.3 49 79.6
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 1.9e-13 79.0 54 74.1
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 3.3e-13 78.2 41 90.2
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-12 75.9 48 79.2
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 4.7e-12 74.3 41 85.4
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 6.2e-12 73.9 43 86.0
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 2.9e-09 65.1 38 78.9
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 8.3e-09 63.5 38 76.3
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 8.3e-09 63.5 38 78.9
Migut.N00577 Erythranthe guttata HOM05D000963 ORTHO05D004715 8.3e-09 63.5 45 73.3
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 1.9e-08 62.4 38 76.3
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 4.1e-08 61.2 38 76.3
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.4e-08 60.8 38 73.7
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-07 59.7 38 73.7
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 6.0e-07 57.4 73 52.1
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 1.3e-06 56.2 38 73.7
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 1.3e-06 56.2 38 71.1
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-06 55.8 38 71.1
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 2.3e-06 55.5 38 71.1
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 2.3e-06 55.5 38 71.1
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 5.1e-06 54.3 43 62.8
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 6.6e-06 53.9 38 68.4
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 8.6e-06 53.5 38 68.4


User provided reference genes

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