Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 6.4e-196 687.2 336 100.0
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.0e-189 665.6 336 97.0
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 3.7e-167 591.7 335 83.9
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.5e-157 559.7 333 80.8
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.2e-156 555.8 334 79.3
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.4e-155 553.1 336 80.1
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 1.4e-155 553.1 334 79.9
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 1.9e-155 552.7 334 80.2
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 3.2e-155 552.0 334 79.6
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 9.3e-155 550.4 337 80.1
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.0e-153 547.0 334 78.7
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 3.9e-153 545.0 334 79.0
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 5.1e-153 544.7 334 78.7
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 8.7e-153 543.9 326 79.8
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 9.7e-152 540.4 334 78.7
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.4e-150 536.6 334 76.6
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.1e-150 535.4 333 78.7
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.1e-150 535.4 332 78.0
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.9e-150 534.3 332 77.1
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.9e-150 534.3 334 76.3
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.9e-150 534.3 334 76.3
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 9.0e-150 533.9 331 78.5
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.4e-149 531.9 334 75.7
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 6.5e-148 527.7 337 75.1
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 4.2e-147 525.0 336 74.4
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 5.5e-147 524.6 335 75.2
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 7.2e-147 524.2 333 77.2
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.6e-146 523.1 336 76.2
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 6.1e-146 521.2 332 77.1
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 6.1e-146 521.2 337 75.4
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 5.1e-145 518.1 334 74.0
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 8.8e-145 517.3 334 74.9
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.1e-144 516.9 334 74.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 4.3e-144 515.0 328 75.3
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.8e-143 511.5 334 74.0
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.4e-142 510.0 329 74.5
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 4.1e-142 508.4 325 74.8
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 5.3e-142 508.1 325 74.8
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 6.9e-142 507.7 334 72.8
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 9.1e-142 507.3 338 72.2
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 9.1e-142 507.3 335 71.9
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.6e-141 505.8 325 73.8
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 4.5e-141 505.0 336 72.0
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 7.7e-141 504.2 332 73.8
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 1.0e-140 503.8 335 75.5
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.0e-140 501.5 326 72.4
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 2.5e-139 499.2 335 71.6
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 5.5e-139 498.0 334 72.8
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 7.2e-139 497.7 328 72.6
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.8e-137 493.0 324 73.8
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 3.9e-137 491.9 331 72.5
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 8.8e-137 490.7 334 71.9
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.5e-136 490.0 322 72.7
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 2.6e-136 489.2 334 72.2
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 5.7e-136 488.0 331 71.6
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 6.3e-135 484.6 324 72.5
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.1e-134 483.8 331 71.6
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.8e-134 483.0 331 71.9
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 3.1e-134 482.3 334 71.0
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 5.3e-134 481.5 331 71.3
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 7.0e-134 481.1 332 73.5
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.2e-133 480.3 340 70.3
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.5e-133 479.9 333 71.8
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 2.0e-133 479.6 332 68.4
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.7e-132 476.5 320 71.9
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.2e-132 476.1 331 71.3
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 3.8e-132 475.3 330 69.7
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.8e-132 475.3 331 71.6
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 6.5e-132 474.6 320 71.6
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.9e-131 473.0 316 71.2
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.6e-130 469.9 319 71.2
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.7e-130 469.2 309 74.1
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 8.0e-130 467.6 316 70.9
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 8.0e-130 467.6 316 70.9
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 8.0e-130 467.6 316 70.9
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 8.0e-130 467.6 316 70.9
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 8.0e-130 467.6 316 70.9
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 2.3e-129 466.1 316 70.9
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.1e-128 463.8 316 70.6
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 3.7e-127 458.8 309 71.8
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 8.2e-127 457.6 333 66.7
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 6.1e-122 441.4 335 64.2
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.0e-121 440.7 328 65.5
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 5.2e-121 438.3 337 65.0
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 6.7e-121 438.0 332 65.7
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.6e-120 436.0 327 64.8
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 5.9e-117 424.9 319 63.9
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 8.5e-116 421.0 335 64.2
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.9e-115 419.9 331 65.9
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 7.5e-104 381.3 303 60.7
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 9.2e-102 374.4 308 58.1
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.6e-101 373.6 329 58.1
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.1e-98 363.2 295 63.4
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.1e-94 349.0 206 80.6
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.9e-86 323.6 203 75.4
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 2.1e-85 320.1 307 53.1
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.0e-84 317.8 306 53.9
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.2e-82 310.8 305 52.8
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.8e-82 309.7 214 71.0
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.5e-80 303.9 253 61.3
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.3e-75 285.0 160 83.1
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 6.0e-69 265.4 190 67.4
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 5.6e-67 258.8 177 67.2
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.0e-65 251.5 133 86.5
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.9e-63 246.5 163 69.9
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.1e-58 230.3 157 70.7
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.4e-56 223.0 283 46.6
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 9.3e-54 214.9 256 50.4
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.2e-47 193.7 130 76.2
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.4e-47 191.8 145 66.2
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 2.5e-43 180.3 89 89.9
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.2e-42 175.6 144 63.2
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.2e-30 136.7 124 57.3
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.1e-29 132.5 107 57.0
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.2e-22 109.0 72 72.2
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.7e-18 97.8 218 36.2
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 9.4e-14 82.0 69 58.0
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 4.4e-11 73.2 128 36.7
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.8e-09 67.8 148 33.1
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 2.9e-07 60.5 271 23.2
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 3.8e-07 60.1 193 29.5
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 5.5e-06 56.2 168 29.2


User provided reference genes

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