Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 3.8e-163 578.6 396 100.0
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 1.7e-115 420.2 389 80.7
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 1.8e-56 224.2 291 55.7
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 3.5e-52 209.9 287 51.9
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 5.6e-50 202.6 299 47.5
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 4.8e-49 199.5 310 45.8
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 1.8e-48 197.6 300 51.0
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 3.1e-48 196.8 288 46.5
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 9.0e-48 195.3 289 49.5
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 2.2e-46 190.7 296 45.6
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 1.4e-45 188.0 294 48.6
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 6.0e-44 182.6 300 48.3
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 7.9e-44 182.2 297 45.1
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 2.3e-43 180.6 296 43.2
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 3.0e-43 180.3 293 44.7
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 1.5e-42 177.9 298 46.3
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 1.5e-42 177.9 291 44.3
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 5.6e-42 176.0 296 45.9
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 3.7e-41 173.3 290 43.4
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 4.8e-41 172.9 291 43.3
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 5.3e-40 169.5 297 45.1
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 5.3e-40 169.5 297 45.1
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 1.2e-39 168.3 294 43.9
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 3.4e-39 166.8 307 43.0
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 5.8e-39 166.0 298 41.3
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 5.8e-39 166.0 294 46.6
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 4.9e-38 162.9 301 46.2
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 1.1e-37 161.8 301 48.2
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 1.1e-37 161.8 295 42.0
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 4.2e-37 159.8 307 47.2
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 5.5e-37 159.5 297 46.8
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 5.5e-37 159.5 291 42.3
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 1.2e-36 158.3 311 40.2
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 3.5e-36 156.8 295 45.4
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 7.9e-36 155.6 297 44.4
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 1.0e-35 155.2 250 42.0
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 1.8e-35 154.5 291 38.8
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 1.8e-35 154.5 225 44.0
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 3.0e-35 153.7 297 45.5
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 6.7e-35 152.5 300 43.7
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 1.1e-34 151.8 301 39.9
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.1e-34 151.8 300 40.0
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 1.1e-34 151.8 300 44.3
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 1.9e-34 151.0 301 43.9
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 1.9e-34 151.0 305 45.6
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 5.7e-34 149.4 296 40.5
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 5.7e-34 149.4 289 42.6
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 5.7e-34 149.4 289 42.6
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 4.0e-32 143.3 291 41.9
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 5.3e-32 142.9 294 41.5
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 1.2e-31 141.7 299 41.8
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 5.8e-31 139.4 292 42.5
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 1.7e-30 137.9 297 42.1
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 2.2e-30 137.5 294 37.4
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 3.8e-30 136.7 294 41.2
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.1e-29 135.2 311 43.1
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 1.4e-29 134.8 312 38.8
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 5.5e-29 132.9 287 41.8
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 5.5e-29 132.9 295 41.0
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 1.2e-28 131.7 295 39.3
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 2.7e-28 130.6 291 40.9
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 3.3e-26 123.6 294 37.8
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 5.7e-26 122.9 293 39.9
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 3.1e-24 117.1 290 37.9
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 4.1e-24 116.7 296 38.5
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 5.3e-24 116.3 296 36.1
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.2e-23 115.2 301 39.5
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 1.2e-23 115.2 276 39.1
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 3.4e-23 113.6 295 37.6
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 7.7e-23 112.5 305 37.0
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 1.0e-22 112.1 293 34.8
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 2.2e-22 110.9 289 35.6
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 2.9e-22 110.5 303 38.3
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 2.7e-20 104.0 304 34.9
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 3.6e-20 103.6 291 34.0
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 3.3e-18 97.1 301 35.5
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 5.7e-18 96.3 316 33.2
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 2.8e-17 94.0 305 37.4
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 3.7e-17 93.6 304 33.2
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 8.2e-17 92.4 329 34.0
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 1.1e-16 92.0 293 31.4
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 1.1e-16 92.0 292 37.7
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 1.8e-16 91.3 286 33.9
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 1.8e-16 91.3 299 34.8
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 4.1e-16 90.1 304 33.6
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 1.5e-15 88.2 285 31.9
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 2.6e-15 87.4 298 31.2
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 5.9e-15 86.3 295 32.9
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 1.0e-14 85.5 298 32.9
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.3e-14 85.1 300 34.0
ClCG06G001430 Citrullus lanatus HOM05D007706 ORTHO05D009593 5.0e-14 83.2 295 34.6
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 2.5e-13 80.9 296 32.1
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 2.1e-12 77.8 105 51.4
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 7.9e-12 75.9 296 33.1
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 7.9e-12 75.9 296 32.8
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 1.0e-11 75.5 231 34.2
Potri.008G172200 Populus trichocarpa HOM05D006910 ORTHO05D008937 1.0e-11 75.5 295 30.8
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 2.3e-11 74.3 106 41.5
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 3.9e-11 73.6 280 30.7
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 6.7e-11 72.8 296 31.8
CDE11G0528 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 8.8e-11 72.4 296 30.1
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 8.8e-11 72.4 176 35.8
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 1.5e-10 71.6 238 32.4
Ciclev10004771m.g Citrus clementina HOM05D006910 ORTHO05D008937 7.4e-10 69.3 293 31.1
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 9.7e-10 68.9 297 34.7
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 8.2e-09 65.9 34 82.4
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 8.2e-09 65.9 85 47.1
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.4e-08 65.1 81 50.6
ATR0787G077 Amborella trichopoda HOM05D007706 ORTHO05D009593 2.4e-08 64.3 307 31.3
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 4.1e-08 63.5 45 66.7
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 5.3e-08 63.2 79 40.5
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 9.1e-08 62.4 316 30.7
Actinidia30125 Actinidia chinensis HOM05D007706 ORTHO05D009593 4.5e-07 60.1 61 50.8
Lj6C621T3 Lonicera japonica HOM05D006910 ORTHO05D008937 4.5e-07 60.1 101 36.6
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 5.9e-07 59.7 206 30.6
Sed0022884 Sechium edule HOM05D007706 ORTHO05D009593 5.9e-07 59.7 229 31.0
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 1.0e-06 58.9 160 36.2
Actinidia30127 Actinidia chinensis HOM05D007706 ORTHO05D009593 2.2e-06 57.8 74 44.6
Hma1.2p1_0112F.1_g054780 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 2.2e-06 57.8 31 80.6
Nitab4.5_0002210g0060 Nicotiana tabacum HOM05D006910 ORTHO05D008937 2.2e-06 57.8 97 37.1
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 5.0e-06 56.6 94 40.4
Glyma.10G190700 Glycine max HOM05D006910 ORTHO05D008937 6.5e-06 56.2 37 62.2
Phvul.011G133545 Phaseolus vulgaris HOM05D006910 ORTHO05D008937 6.5e-06 56.2 37 62.2
QL06p021124 Quercus lobata HOM05D006910 ORTHO05D008937 6.5e-06 56.2 31 77.4
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 8.5e-06 55.8 87 42.5


User provided reference genes

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