Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 2.2e-57 225.3 108 100.0
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 3.8e-41 171.4 87 94.3
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 1.8e-35 152.5 110 70.9
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 3.4e-34 148.3 109 65.1
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 4.5e-34 147.9 108 66.7
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.9e-34 147.5 109 68.8
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 5.9e-34 147.5 111 66.7
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 7.6e-34 147.1 109 67.9
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.9e-33 145.2 108 65.7
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 3.8e-33 144.8 110 67.3
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 6.5e-33 144.1 110 65.5
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 6.5e-33 144.1 110 66.4
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 8.5e-33 143.7 110 67.3
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 8.5e-33 143.7 110 66.4
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.2e-32 141.7 110 65.5
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 3.2e-32 141.7 110 65.5
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 7.2e-32 140.6 103 68.0
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 7.2e-32 140.6 111 63.1
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.6e-31 139.4 110 64.5
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 1.6e-31 139.4 105 63.8
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 7.9e-31 137.1 114 63.2
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 2.3e-30 135.6 110 62.7
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 3.9e-30 134.8 103 64.1
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.9e-30 134.8 103 64.1
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 5.1e-30 134.4 103 64.1
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 5.1e-30 134.4 104 64.4
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 6.7e-30 134.0 115 63.5
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 6.7e-30 134.0 107 63.6
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 8.8e-30 133.7 113 64.6
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 1.9e-29 132.5 108 62.0
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 2.5e-29 132.1 112 62.5
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 3.3e-29 131.7 110 62.7
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 5.7e-29 131.0 110 62.7
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 7.4e-29 130.6 109 62.4
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.3e-28 129.8 103 63.1
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 6.3e-28 127.5 112 58.9
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 6.3e-28 127.5 109 62.4
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 1.1e-27 126.7 114 59.6
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 1.8e-27 125.9 113 61.1
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 1.8e-27 125.9 110 60.9
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 4.1e-27 124.8 110 59.1
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 5.3e-27 124.4 107 57.9
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 6.9e-27 124.0 111 56.8
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 6.9e-27 124.0 99 63.6
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 6.9e-27 124.0 111 57.7
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 2.0e-26 122.5 110 59.1
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 2.0e-26 122.5 108 58.3
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 4.5e-26 121.3 110 57.3
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 4.5e-26 121.3 111 59.5
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 5.9e-26 120.9 106 56.6
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 7.7e-26 120.6 109 56.0
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.9e-25 118.6 86 69.8
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 5.0e-25 117.9 103 56.3
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 8.5e-25 117.1 109 52.3
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 1.1e-24 116.7 72 72.2
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 1.4e-24 116.3 110 55.5
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 1.4e-24 116.3 105 55.2
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 1.9e-24 115.9 99 59.6
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 1.9e-24 115.9 108 56.5
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 3.2e-24 115.2 108 55.6
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 3.2e-24 115.2 100 57.0
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 4.2e-24 114.8 106 57.5
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 5.5e-24 114.4 104 55.8
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 5.5e-24 114.4 105 59.0
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 5.5e-24 114.4 110 54.5
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 5.5e-24 114.4 51 92.2
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 5.5e-24 114.4 107 53.3
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 7.2e-24 114.0 100 57.0
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 7.2e-24 114.0 111 55.9
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 7.2e-24 114.0 111 55.9
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 7.2e-24 114.0 111 55.9
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.2e-23 113.2 105 56.2
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.2e-23 113.2 101 58.4
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 1.6e-23 112.8 97 55.7
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.6e-23 112.8 114 51.8
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 1.6e-23 112.8 109 52.3
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 2.1e-23 112.5 97 54.6
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 2.1e-23 112.5 97 54.6
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 2.1e-23 112.5 97 54.6
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 2.1e-23 112.5 97 54.6
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 2.1e-23 112.5 80 67.5
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 2.1e-23 112.5 107 52.3
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 2.1e-23 112.5 104 53.8
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 2.1e-23 112.5 105 55.2
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 2.1e-23 112.5 76 68.4
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 2.7e-23 112.1 98 56.1
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 4.7e-23 111.3 105 53.3
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 4.7e-23 111.3 106 52.8
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 6.1e-23 110.9 56 80.4
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 6.1e-23 110.9 107 53.3
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 7.9e-23 110.5 80 62.5
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 1.0e-22 110.2 62 69.4
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 3.9e-22 108.2 105 53.3
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 5.1e-22 107.8 107 49.5
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 5.1e-22 107.8 59 78.0
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 6.7e-22 107.5 100 56.0
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 8.8e-22 107.1 70 67.1
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 8.8e-22 107.1 96 55.2
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 8.8e-22 107.1 50 84.0
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 1.5e-21 106.3 47 89.4
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 2.6e-21 105.5 110 50.0
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 4.4e-21 104.8 97 54.6
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 3.7e-20 101.7 86 58.1
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 2.4e-19 99.0 111 48.6
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 3.1e-19 98.6 98 50.0
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 3.1e-19 98.6 111 46.8
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 6.9e-19 97.4 70 64.3
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 9.1e-19 97.1 51 72.5
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 1.5e-18 96.3 108 46.3
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.5e-18 96.3 77 55.8
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 1.3e-17 93.2 57 64.9
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 8.5e-17 90.5 79 51.9
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 4.2e-16 88.2 114 39.5
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 5.5e-16 87.8 111 48.6
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 2.3e-14 82.4 49 59.2
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 3.0e-14 82.0 51 62.7


User provided reference genes

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