Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 1.4e-69 266.2 136 100.0
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.4e-37 159.1 90 85.6
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 5.5e-37 157.9 86 88.4
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 7.1e-37 157.5 86 88.4
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 7.1e-37 157.5 86 87.2
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 1.6e-36 156.4 90 82.2
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 6.0e-36 154.5 86 83.7
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 6.0e-36 154.5 90 83.3
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 6.0e-36 154.5 86 86.0
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 1.0e-35 153.7 90 81.1
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 1.3e-35 153.3 90 82.2
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 1.3e-35 153.3 86 84.9
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 1.3e-35 153.3 90 84.4
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 1.3e-35 153.3 86 82.6
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.8e-35 152.9 90 82.2
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 2.3e-35 152.5 90 80.0
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 2.3e-35 152.5 90 83.3
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 2.3e-35 152.5 90 81.1
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 3.0e-35 152.1 90 81.1
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 3.0e-35 152.1 90 81.1
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 3.0e-35 152.1 90 81.1
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 3.0e-35 152.1 90 82.2
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 3.0e-35 152.1 86 82.6
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 3.0e-35 152.1 86 82.6
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 3.9e-35 151.8 90 83.3
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 5.1e-35 151.4 90 82.2
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 6.7e-35 151.0 90 81.1
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 8.7e-35 150.6 88 80.7
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 8.7e-35 150.6 90 80.0
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 8.7e-35 150.6 90 78.9
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 1.1e-34 150.2 90 78.9
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 1.1e-34 150.2 90 78.9
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 1.1e-34 150.2 86 79.1
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 1.5e-34 149.8 90 80.0
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.9e-34 149.4 90 81.1
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 1.9e-34 149.4 86 82.6
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 2.5e-34 149.1 90 77.8
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 2.5e-34 149.1 90 77.8
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.5e-34 149.1 90 78.9
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 4.3e-34 148.3 90 80.0
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 5.6e-34 147.9 90 74.4
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 5.6e-34 147.9 90 76.7
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 5.6e-34 147.9 90 76.7
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 7.4e-34 147.5 88 78.4
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 7.4e-34 147.5 88 79.5
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 7.4e-34 147.5 86 81.4
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 9.6e-34 147.1 86 82.6
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 9.6e-34 147.1 86 80.2
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 1.3e-33 146.7 90 77.8
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.3e-33 146.7 86 80.2
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 1.3e-33 146.7 90 77.8
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 2.1e-33 146.0 90 76.7
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.1e-33 146.0 86 82.6
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 3.7e-33 145.2 90 75.6
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 3.7e-33 145.2 86 80.2
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 3.7e-33 145.2 90 78.9
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 4.8e-33 144.8 86 80.2
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 4.8e-33 144.8 90 76.7
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 4.8e-33 144.8 90 75.6
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 4.8e-33 144.8 122 62.3
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 6.2e-33 144.4 90 76.7
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 8.2e-33 144.1 90 75.6
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 8.2e-33 144.1 90 77.8
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 8.2e-33 144.1 86 81.4
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.1e-32 143.7 124 60.5
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 1.1e-32 143.7 90 77.8
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 1.8e-32 142.9 89 75.3
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 2.4e-32 142.5 86 76.7
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 2.4e-32 142.5 90 74.4
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.0e-32 141.7 90 74.4
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 4.0e-32 141.7 84 78.6
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 4.0e-32 141.7 88 79.5
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 6.9e-32 141.0 90 72.2
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 6.9e-32 141.0 86 79.1
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 6.9e-32 141.0 86 76.7
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 9.0e-32 140.6 97 73.2
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.2e-31 140.2 84 79.8
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.2e-31 140.2 88 75.0
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.2e-31 140.2 90 75.6
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 2.0e-31 139.4 91 76.9
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 2.0e-31 139.4 91 76.9
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.0e-31 139.4 90 72.2
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 2.6e-31 139.0 90 70.0
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 3.4e-31 138.7 86 74.4
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 3.4e-31 138.7 90 75.6
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 4.5e-31 138.3 91 76.9
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 5.8e-31 137.9 90 71.1
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 5.8e-31 137.9 90 72.2
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 7.6e-31 137.5 90 71.1
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 7.6e-31 137.5 92 69.6
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 2.2e-30 136.0 89 75.3
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.9e-29 132.9 86 69.8
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 4.2e-29 131.7 86 72.1
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 5.5e-29 131.3 94 71.3
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 7.1e-29 131.0 84 75.0
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 9.3e-29 130.6 72 83.3
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 1.2e-28 130.2 98 68.4
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 2.1e-28 129.4 120 55.8
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 2.7e-28 129.0 86 75.6
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 3.5e-28 128.6 86 74.4
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 4.6e-28 128.3 90 71.1
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 6.0e-28 127.9 70 85.7
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 6.7e-27 124.4 86 67.4
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 2.5e-26 122.5 70 82.9
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 3.3e-26 122.1 69 84.1
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.3e-25 120.2 70 77.1
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.4e-24 116.7 66 83.3
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 6.9e-24 114.4 63 82.5
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 2.0e-23 112.8 71 78.9
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 2.9e-22 109.0 68 76.5
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 8.5e-22 107.5 68 72.1
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.4e-21 106.7 57 87.7
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 2.5e-21 105.9 60 85.0
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 9.4e-21 104.0 72 68.1
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 2.7e-20 102.4 71 76.1
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 1.0e-19 100.5 77 68.8
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.4e-19 100.1 69 65.2
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 2.8e-17 92.4 93 51.6
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 3.4e-15 85.5 47 85.1
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 7.2e-13 77.8 93 44.1
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 2.7e-12 75.9 53 71.7
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 6.1e-12 74.7 90 46.7
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.1e-08 62.4 47 61.7
arahy.Tifrunner.gnm1.ann1.3U8U6D Arachis hypogaea HOM05D054567 ORTHO05D007600 7.7e-07 57.8 57 57.9
arahy.Tifrunner.gnm1.ann1.DI5ISS Arachis hypogaea HOM05D006090 ORTHO05D038896 2.9e-06 55.8 41 68.3
AUR62016546 Chenopodium quinoa HOM05D006090 ORTHO05D007600 8.5e-06 54.3 51 52.9


User provided reference genes

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