Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 1.3e-106 389.8 210 100.0
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 1.3e-90 336.7 210 88.1
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 6.0e-43 178.3 230 52.2
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 7.4e-41 171.4 224 52.2
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 2.9e-37 159.5 196 52.6
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 6.5e-37 158.3 211 52.1
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 6.5e-37 158.3 223 49.3
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 1.1e-36 157.5 211 54.0
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 2.5e-36 156.4 221 50.2
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 4.2e-36 155.6 201 51.2
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 1.6e-35 153.7 201 51.2
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 1.6e-35 153.7 223 46.6
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 1.6e-35 153.7 182 53.8
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 2.1e-35 153.3 214 50.9
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 2.1e-35 153.3 220 48.2
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 3.5e-35 152.5 149 58.4
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 6.0e-35 151.8 176 55.1
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 7.9e-35 151.4 195 51.8
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 7.9e-35 151.4 227 51.5
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 2.3e-34 149.8 186 53.8
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 3.0e-34 149.4 192 54.7
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 3.0e-34 149.4 198 52.5
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 1.5e-33 147.1 203 48.3
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 2.5e-33 146.4 208 48.6
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 3.3e-33 146.0 207 48.3
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 5.7e-33 145.2 153 57.5
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 7.4e-33 144.8 215 49.3
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 7.4e-33 144.8 201 50.2
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 7.4e-33 144.8 164 56.1
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 9.6e-33 144.4 153 56.9
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 2.8e-32 142.9 208 47.1
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 4.8e-32 142.1 216 47.2
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 6.2e-32 141.7 187 47.1
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 6.2e-32 141.7 162 53.1
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 6.2e-32 141.7 173 52.0
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 8.2e-32 141.4 188 47.9
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 1.1e-31 141.0 157 56.1
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.4e-31 140.6 179 49.7
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.8e-31 140.2 208 50.0
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 3.1e-31 139.4 183 55.2
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 1.2e-30 137.5 191 48.7
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 1.5e-30 137.1 209 47.4
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.5e-30 137.1 189 50.3
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 2.6e-30 136.3 126 61.9
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 4.5e-30 135.6 141 58.2
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 4.5e-30 135.6 231 46.3
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 1.3e-29 134.0 147 55.8
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.7e-29 133.7 126 64.3
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 2.2e-29 133.3 126 58.7
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 2.9e-29 132.9 147 55.1
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 3.8e-29 132.5 126 64.3
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 6.5e-29 131.7 171 52.0
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 6.5e-29 131.7 140 58.6
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.1e-28 131.0 222 44.6
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.4e-28 130.6 178 51.1
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 1.9e-28 130.2 168 49.4
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 1.9e-28 130.2 196 48.0
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.5e-28 129.8 178 50.0
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 4.2e-28 129.0 156 55.8
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 5.5e-28 128.6 181 50.8
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 7.1e-28 128.3 149 57.0
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 7.1e-28 128.3 149 57.0
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 9.3e-28 127.9 120 61.7
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 9.3e-28 127.9 127 63.8
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 1.6e-27 127.1 210 46.7
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 6.1e-27 125.2 101 65.3
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 2.3e-26 123.2 126 57.9
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 3.0e-26 122.9 122 57.4
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 6.7e-26 121.7 187 47.6
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 1.5e-25 120.6 231 42.0
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 3.3e-25 119.4 142 51.4
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 5.7e-25 118.6 142 50.7
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 7.4e-25 118.2 140 53.6
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 3.7e-24 115.9 140 53.6
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 6.3e-24 115.2 144 48.6
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 1.8e-23 113.6 196 44.9
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 3.1e-23 112.8 205 42.4
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 3.1e-23 112.8 117 52.1
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 4.1e-23 112.5 209 46.4
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 6.9e-23 111.7 136 52.9
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 1.2e-22 110.9 158 46.2
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.2e-22 110.9 166 48.2
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 1.2e-22 110.9 181 44.2
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 1.5e-22 110.5 121 55.4
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 2.6e-22 109.8 154 45.5
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 3.4e-22 109.4 132 49.2
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 3.4e-22 109.4 190 43.7
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 3.4e-22 109.4 135 54.1
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 4.5e-22 109.0 115 56.5
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 4.5e-22 109.0 111 57.7
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 4.5e-22 109.0 152 44.1
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 5.9e-22 108.6 234 40.6
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 1.0e-21 107.8 130 50.0
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 1.0e-21 107.8 97 62.9
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.3e-21 107.5 123 55.3
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 8.5e-21 104.8 187 41.7
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 1.4e-20 104.0 105 57.1
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 2.5e-20 103.2 206 41.3
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 3.2e-20 102.8 115 54.8
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 3.2e-20 102.8 124 52.4
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 3.2e-20 102.8 147 47.6
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 9.4e-20 101.3 137 47.4
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 2.1e-19 100.1 170 40.6
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 3.6e-19 99.4 160 46.9
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 6.1e-19 98.6 117 52.1
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 6.1e-19 98.6 86 62.8
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 7.9e-19 98.2 145 44.1
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 1.0e-18 97.8 183 39.3
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 8.8e-18 94.7 98 56.1
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 2.0e-17 93.6 113 54.9
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 3.1e-15 86.3 86 58.1
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 4.1e-15 85.9 183 36.6
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 6.9e-15 85.1 197 36.0
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 3.4e-14 82.8 172 39.5
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 3.4e-14 82.8 166 43.4
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 5.9e-14 82.0 140 42.1
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 7.7e-14 81.6 201 36.8
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 2.2e-13 80.1 108 46.3
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 2.2e-13 80.1 138 44.9
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 3.8e-13 79.3 101 44.6
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 3.2e-12 76.3 105 48.6
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.2e-12 76.3 105 48.6
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.2e-12 75.9 103 49.5
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.2e-12 75.9 103 49.5
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 9.4e-12 74.7 90 53.3
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 6.1e-11 72.0 69 59.4
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 8.8e-10 68.2 73 50.7
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 1.7e-08 63.9 142 34.5


User provided reference genes

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