Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 8.2e-149 530.4 275 100.0
Sabra02G0183100 Salix brachista HOM05D000347 ORTHO05D008062 4.3e-97 358.6 241 80.9
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 8.1e-80 301.2 286 60.8
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 2.6e-70 269.6 286 58.0
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 1.3e-66 257.3 272 54.4
RcHm_v2.0_Chr6g0285151 Rosa chinensis HOM05D000347 ORTHO05D008062 1.3e-66 257.3 285 56.1
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 1.7e-66 256.9 288 54.2
FvH4_2g19360 Fragaria vesca HOM05D000347 ORTHO05D008062 3.3e-65 252.7 284 55.6
Prupe.8G205000 Prunus persica HOM05D000347 ORTHO05D000694 4.8e-64 248.8 275 57.1
FAN15G1475 Fragaria x ananassa HOM05D000347 ORTHO05D000694 1.8e-63 246.9 284 54.9
FAN24G2098 Fragaria x ananassa HOM05D000347 ORTHO05D000694 2.4e-63 246.5 282 54.6
FAN27G2014 Fragaria x ananassa HOM05D000347 ORTHO05D008062 5.3e-63 245.4 283 54.1
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 1.2e-62 244.2 287 51.9
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 9.9e-62 241.1 304 52.0
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 2.2e-61 240.0 265 54.7
MD05G1178500 Malus domestica HOM05D000347 ORTHO05D008062 6.4e-61 238.4 288 51.4
MD10G1166700 Malus domestica HOM05D000347 ORTHO05D008062 8.4e-61 238.0 289 51.9
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 8.4e-61 238.0 291 52.9
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 1.9e-60 236.9 278 49.3
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 1.1e-57 227.6 290 49.0
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 1.1e-57 227.6 286 51.7
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 1.9e-57 226.9 336 44.9
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 5.6e-57 225.3 290 49.3
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 9.6e-57 224.6 286 51.4
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 2.8e-56 223.0 284 51.1
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 3.6e-56 222.6 278 50.0
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 1.1e-55 221.1 284 51.1
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 4.5e-54 215.7 298 48.7
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 1.9e-52 210.3 257 50.6
CSS0034279 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D008062 1.2e-51 207.6 185 64.9
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 1.2e-51 207.6 281 48.4
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 1.5e-49 200.7 287 48.1
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 1.3e-48 197.6 298 48.0
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 2.1e-48 196.8 292 45.5
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 3.7e-48 196.1 299 45.5
CsaV3_3G028770 Cucumis sativus L. HOM05D000347 ORTHO05D008062 1.8e-47 193.7 288 45.5
QL09p044668 Quercus lobata HOM05D000347 ORTHO05D008062 4.0e-47 192.6 183 59.6
MSTRG.21431 Avicennia marina HOM05D000347 ORTHO05D008062 5.8e-46 188.7 289 42.9
CiPaw.03G151400 Carya illinoinensis HOM05D000347 ORTHO05D008062 8.4e-45 184.9 170 59.4
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 1.1e-44 184.5 160 66.9
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 1.1e-44 184.5 248 47.2
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 1.9e-44 183.7 279 47.0
Lalb_Chr01g0022451 Lupinus albus HOM05D000347 ORTHO05D008062 4.2e-44 182.6 279 44.8
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 7.1e-44 181.8 279 44.8
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 2.1e-43 180.3 287 44.3
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 2.1e-43 180.3 287 44.3
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 2.1e-43 180.3 306 41.2
Ca_07542_v3 Cicer arietinum L. HOM05D000347 ORTHO05D008062 3.5e-43 179.5 183 56.3
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 7.9e-43 178.3 283 44.2
Sed0024927 Sechium edule HOM05D000901 ORTHO05D008062 5.1e-42 175.6 283 41.7
TAR636G2566 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.5e-41 174.1 300 41.3
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 2.5e-41 173.3 276 45.3
Nitab4.5_0000866g0010 Nicotiana tabacum HOM05D000347 ORTHO05D008062 3.3e-41 172.9 288 42.4
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 9.6e-41 171.4 319 38.6
Actinidia30090 Actinidia chinensis HOM05D000347 ORTHO05D008062 1.6e-40 170.6 181 59.7
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 1.6e-40 170.6 282 42.6
Haze_24776 Corylus avellana HOM05D000347 ORTHO05D008062 6.3e-40 168.7 196 55.6
Oeu018505.1 Olea europaea HOM05D000879 ORTHO05D002043 1.8e-39 167.2 201 51.2
Medtr7g059080 Medicago truncatula HOM05D000347 ORTHO05D008062 1.5e-38 164.1 162 57.4
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 2.2e-37 160.2 158 59.5
Aqoxy2G03776 Aquilegia oxysepala HOM05D000347 ORTHO05D008062 2.9e-37 159.8 301 38.5
arahy.Tifrunner.gnm1.ann1.W0YDFD Arachis hypogaea HOM05D000347 ORTHO05D008062 2.9e-37 159.8 289 40.8
Rhsim13G0044000 Rhododendron simsii HOM05D000347 ORTHO05D008062 5.0e-37 159.1 182 57.7
Sed0024241 Sechium edule HOM05D000347 ORTHO05D008062 5.5e-36 155.6 235 45.1
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 5.5e-36 155.6 218 48.2
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 1.6e-35 154.1 253 41.9
Glyma.16G094000 Glycine max HOM05D000347 ORTHO05D008062 7.9e-35 151.8 266 38.7
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 2.3e-34 150.2 212 48.1
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 4.3e-33 146.0 182 52.7
Gorai.004G225100 Gossypium raimondii HOM05D000347 ORTHO05D008062 5.7e-33 145.6 292 39.7
vmacro02746 Vaccinium macrocarpon HOM05D000347 ORTHO05D008062 5.7e-33 145.6 180 53.3
MELO3C018065.2 Cucumis melo HOM05D000347 ORTHO05D008062 9.7e-33 144.8 188 51.1
Gohir.D08G211800 Gossypium hirsutum HOM05D000347 ORTHO05D008062 1.6e-32 144.1 290 38.6
arahy.Tifrunner.gnm1.ann1.54FW37 Arachis hypogaea HOM05D000347 ORTHO05D008062 3.1e-31 139.8 256 41.0
Gohir.A08G194000 Gossypium hirsutum HOM05D000347 ORTHO05D008062 3.1e-31 139.8 293 37.9
PGSC0003DMG400003422 Solanum tuberosum HOM05D000347 ORTHO05D008062 1.2e-30 137.9 157 53.5
Peaxi162Scf02141g00004 Petunia axillaris HOM05D000347 ORTHO05D008062 7.2e-28 128.6 193 43.0
Lj3g0009150 Lotus japonicus HOM05D000347 ORTHO05D008062 1.2e-27 127.9 276 38.8
Peaxi162Scf00517g00428 Petunia axillaris HOM05D000347 ORTHO05D008062 1.2e-27 127.9 246 37.0
Carub.0003s2514 Capsella rubella HOM05D011699 ORTHO05D008062 1.6e-27 127.5 247 40.9
Lsat_1_v5_gn_5_179760 Lactuca sativa HOM05D000347 ORTHO05D008062 7.9e-27 125.2 191 48.7
AUR62031831 Chenopodium quinoa HOM05D000347 ORTHO05D008062 3.0e-26 123.2 185 47.0
Medtr0027s0200 Medicago truncatula HOM05D000347 ORTHO05D008062 3.0e-26 123.2 185 44.9
Atru.chr5.2056 Acer truncatum HOM05D000347 ORTHO05D008062 8.8e-26 121.7 110 60.9
Phvul.010G019000 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 1.3e-24 117.9 211 42.7
Phvul.010G019300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 1.3e-24 117.9 245 39.2
Nitab4.5_0003790g0070 Nicotiana tabacum HOM05D000347 ORTHO05D008062 4.8e-24 115.9 113 57.5
VMungo0331G1006 Vigna mungo HOM05D000347 ORTHO05D008062 1.4e-23 114.4 255 36.1
AT3G24750 Arabidopsis thaliana HOM05D011699 ORTHO05D008062 6.9e-23 112.1 217 41.0
AL3G40480 Arabidopsis lyrata HOM05D011699 ORTHO05D008062 2.0e-22 110.5 218 41.7
Nn3g19918 Nelumbo nucifera HOM05D000347 ORTHO05D008062 1.3e-21 107.8 193 38.3
DCAR_004713 Daucus carota HOM05D000347 ORTHO05D008062 1.7e-21 107.5 187 42.8
BcaB06g26692 Brassica carinata HOM05D011699 ORTHO05D008062 2.9e-21 106.7 211 37.0
Nitab4.5_0002085g0080 Nicotiana tabacum HOM05D000347 ORTHO05D008062 2.9e-21 106.7 237 35.9
Ah.08g214040 Amaranthus hybridus HOM05D000901 ORTHO05D008062 5.0e-21 105.9 239 38.9
DCAR_018551 Daucus carota HOM05D000347 ORTHO05D008062 6.5e-21 105.5 186 43.0
Sp3g22490 Schrenkiella parvula HOM05D011699 ORTHO05D008062 2.1e-19 100.5 209 37.8
Sc05g0002410 Simmondsia chinensis HOM05D000347 ORTHO05D008062 2.1e-19 100.5 252 35.7
A07p07520 Brassica napus HOM05D011699 ORTHO05D008062 3.6e-19 99.8 281 32.0
BraA07t28543Z Brassica rapa HOM05D011699 ORTHO05D008062 3.6e-19 99.8 281 32.0
BcaC06g35749 Brassica carinata HOM05D011699 ORTHO05D008062 1.8e-18 97.4 206 35.9
C07p11290 Brassica napus HOM05D011699 ORTHO05D008062 2.3e-18 97.1 282 30.9
BolC7t41607H Brassica oleracea HOM05D011699 ORTHO05D008062 5.1e-18 95.9 271 30.6
Sc24g0003600 Simmondsia chinensis HOM05D000347 ORTHO05D008062 5.7e-17 92.4 149 43.0
THA.LOC104821644 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 7.4e-17 92.0 182 41.2
AUR62008877 Chenopodium quinoa HOM05D000347 ORTHO05D008062 2.2e-16 90.5 144 42.4
MBI07_g21075_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D008062 2.2e-16 90.5 199 41.2
Thhalv10002691m.g Eutrema salsugineum HOM05D011699 ORTHO05D008062 3.7e-16 89.7 179 38.5
Oeu058867.1 Olea europaea HOM05D000347 ORTHO05D008062 3.5e-14 83.2 80 60.0
CARHR101080 Cardamine hirsuta HOM05D011699 ORTHO05D008062 2.9e-13 80.1 263 31.2
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 3.6e-11 73.2 139 40.3
PSO017G1362 Papaver somniferum HOM05D000347 ORTHO05D008062 3.3e-09 66.6 226 35.4
THA.LOC104804603 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 9.7e-09 65.1 243 30.9
EL10Ac7g17790 Beta vulgaris HOM05D000347 ORTHO05D008062 1.3e-08 64.7 237 27.0
Nitab4.5_0006773g0040 Nicotiana tabacum HOM05D000347 ORTHO05D008062 6.3e-08 62.4 101 39.6
unitig_8.g3754 Utricularia gibba HOM05D004922 ORTHO05D005990 8.2e-08 62.0 175 36.0
SalBow2G2623 Salvia bowleyana HOM05D000347 ORTHO05D008062 1.8e-07 60.8 249 30.5
ECA248G1409 Erigeron canadensis HOM05D000102 ORTHO05D000138 9.1e-07 58.5 71 46.5
PSO063G6109 Papaver somniferum HOM05D000347 ORTHO05D008062 1.2e-06 58.2 144 41.7
Zm00001eb379630 Zea mays HOM05D042818 ORTHO05D008062 4.5e-06 56.2 167 34.7


User provided reference genes

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