Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 9.4e-281 969.5 488 100.0
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 2.3e-234 815.5 533 80.3
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 4.7e-224 781.2 551 75.7
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.3e-130 469.9 488 53.5
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 4.3e-108 396.0 492 48.6
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 1.9e-95 354.0 503 46.1
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 2.3e-93 347.1 492 44.3
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 9.9e-89 331.6 490 43.1
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.6e-86 324.3 487 41.9
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 2.1e-86 323.9 442 44.8
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 8.1e-83 312.0 526 41.1
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 2.4e-82 310.5 475 41.9
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 9.3e-79 298.5 481 41.0
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 3.9e-77 293.1 503 39.2
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 2.5e-76 290.4 490 40.0
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 1.6e-75 287.7 507 38.7
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.6e-75 287.7 507 38.5
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 3.1e-74 283.5 498 38.6
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.4e-71 274.6 507 37.5
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 1.8e-69 267.7 503 38.0
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 3.0e-69 266.9 312 51.6
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 3.4e-65 253.4 373 44.0
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 5.8e-65 252.7 498 37.8
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 6.5e-64 249.2 336 44.9
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 1.9e-63 247.7 430 39.1
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 4.6e-62 243.0 495 36.4
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 5.1e-61 239.6 307 47.9
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.9e-60 237.7 332 41.9
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 4.3e-60 236.5 462 37.2
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 1.3e-56 224.9 493 36.1
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.6e-54 218.0 511 36.8
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 2.1e-54 217.6 215 52.6
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 2.3e-53 214.2 498 35.3
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 3.3e-52 210.3 508 34.6
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.6e-51 208.0 488 34.2
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 2.8e-51 207.2 497 35.0
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 4.8e-51 206.5 486 35.4
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 2.4e-50 204.1 384 40.4
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 2.4e-50 204.1 485 35.9
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 5.3e-50 203.0 453 36.9
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 1.2e-49 201.8 492 32.5
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 1.5e-49 201.4 280 49.3
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 2.9e-48 197.2 494 32.6
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 5.0e-48 196.4 494 33.2
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 7.2e-47 192.6 415 37.1
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 1.2e-46 191.8 507 33.7
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 3.6e-46 190.3 489 34.8
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 7.9e-46 189.1 483 33.3
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 1.8e-45 188.0 367 38.7
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 1.5e-44 184.9 383 39.7
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 1.3e-43 181.8 489 32.7
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 1.8e-42 177.9 405 33.8
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 5.9e-41 172.9 453 32.9
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 1.0e-40 172.2 495 29.9
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 1.3e-40 171.8 493 28.4
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 5.0e-40 169.9 505 29.9
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 1.4e-39 168.3 480 31.9
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 5.5e-39 166.4 503 29.0
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 2.7e-38 164.1 319 39.8
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 6.1e-38 162.9 386 34.7
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 6.7e-37 159.5 508 32.1
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 1.3e-35 155.2 431 33.6
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 2.2e-35 154.5 361 34.9
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 4.8e-35 153.3 500 30.2
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 4.8e-35 153.3 435 33.1
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 3.1e-34 150.6 471 31.4
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 5.3e-34 149.8 461 31.0
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 7.0e-34 149.4 346 36.1
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 2.6e-33 147.5 498 30.3
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 2.6e-33 147.5 508 29.5
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 4.5e-33 146.7 387 32.8
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 5.9e-33 146.4 493 30.6
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 5.9e-33 146.4 385 33.8
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 8.5e-32 142.5 366 32.5
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.5e-31 141.7 402 29.6
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 7.2e-31 139.4 513 28.8
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 7.2e-31 139.4 455 29.5
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 2.7e-30 137.5 455 29.2
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 3.6e-30 137.1 497 28.2
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 4.0e-29 133.7 188 44.1
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 1.5e-28 131.7 419 29.4
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 2.6e-28 131.0 478 27.2
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 2.2e-27 127.9 266 38.7
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 2.8e-27 127.5 216 41.2
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 1.1e-26 125.6 459 30.1
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 7.0e-26 122.9 459 28.5
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 3.8e-24 117.1 224 34.4
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 4.2e-23 113.6 389 28.0
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 9.4e-23 112.5 343 30.6
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 2.1e-22 111.3 193 34.7
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 8.3e-19 99.4 197 38.1
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 2.0e-17 94.7 144 38.2
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 1.0e-16 92.4 190 36.8
CiPaw.07G104400 Carya illinoinensis HOM05D007164 ORTHO05D008802 1.3e-16 92.0 189 39.2
Duzib138G1663 Durio zibethinus HOM05D007164 ORTHO05D008802 2.3e-16 91.3 182 34.1
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 2.5e-15 87.8 139 38.1
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 1.8e-13 81.6 348 27.9
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 2.2e-11 74.7 151 31.8
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 2.9e-08 64.3 87 35.6
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 1.5e-07 62.0 66 47.0
GSVIVG01010947001 Vitis vinifera HOM05D007164 ORTHO05D008802 2.8e-06 57.8 65 44.6


User provided reference genes

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