Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.5e-204 716.1 385 100.0
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 6.4e-176 620.9 385 88.3
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 8.4e-176 620.5 412 78.2
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 4.5e-169 598.2 388 77.3
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 1.3e-168 596.7 385 85.5
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 1.6e-158 563.1 394 75.9
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 3.9e-157 558.5 397 72.0
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 3.9e-157 558.5 397 69.5
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 2.5e-156 555.8 389 71.7
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.1e-154 550.4 390 73.6
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 2.6e-153 545.8 394 72.3
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 4.5e-153 545.0 391 71.4
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 5.0e-152 541.6 371 71.2
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 4.2e-151 538.5 389 68.6
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 3.6e-150 535.4 391 68.5
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 6.1e-150 534.6 391 68.3
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.9e-149 531.9 390 67.7
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 6.7e-149 531.2 389 68.6
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 2.6e-148 529.3 391 67.5
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 9.7e-148 527.3 390 71.0
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 2.8e-147 525.8 389 68.1
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 3.7e-147 525.4 389 67.4
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.1e-146 523.9 386 67.6
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.8e-146 523.1 393 67.7
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 4.1e-146 521.9 391 66.5
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 4.5e-145 518.5 422 63.7
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 5.9e-145 518.1 393 65.1
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 1.0e-144 517.3 396 65.2
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 2.2e-144 516.2 397 70.0
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 3.8e-144 515.4 395 65.3
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 6.5e-144 514.6 399 65.4
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 8.5e-144 514.2 395 65.6
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 8.5e-144 514.2 397 65.7
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.4e-143 513.5 397 66.8
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.9e-143 513.1 390 70.5
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 1.9e-143 513.1 393 64.9
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 2.5e-143 512.7 372 69.6
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 7.2e-143 511.1 393 69.5
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 9.4e-143 510.8 398 64.8
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 2.7e-142 509.2 399 63.7
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 3.6e-142 508.8 372 68.3
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 3.6e-142 508.8 372 69.1
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 7.9e-142 507.7 386 66.1
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 1.4e-141 506.9 393 64.6
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 1.8e-141 506.5 394 65.5
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 5.2e-141 505.0 395 64.8
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 8.8e-141 504.2 395 65.3
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 8.8e-141 504.2 392 67.9
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 1.1e-140 503.8 397 64.2
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 3.3e-140 502.3 389 64.5
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 4.4e-140 501.9 444 60.1
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 4.4e-140 501.9 372 64.8
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 5.7e-140 501.5 372 64.8
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 9.7e-140 500.7 390 65.1
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 9.7e-140 500.7 387 65.4
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 9.7e-140 500.7 387 65.4
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 8.2e-139 497.7 400 66.5
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 5.3e-138 495.0 390 70.0
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 3.5e-137 492.3 375 68.0
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 3.5e-137 492.3 393 66.7
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 3.8e-136 488.8 393 63.4
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 5.0e-136 488.4 390 71.0
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.0e-133 480.7 372 66.1
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 1.8e-133 479.9 403 64.3
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 6.7e-133 478.0 384 62.0
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 6.7e-133 478.0 344 69.5
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.2e-132 477.2 390 67.2
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 1.5e-132 476.9 371 61.5
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 3.3e-132 475.7 392 61.7
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 4.4e-132 475.3 371 67.9
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 7.5e-132 474.6 377 66.6
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 1.3e-131 473.8 341 69.5
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 5.3e-130 468.4 376 66.0
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 7.0e-130 468.0 393 61.3
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 9.1e-130 467.6 397 58.9
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.6e-129 466.8 399 62.9
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 2.0e-129 466.5 411 61.1
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 2.0e-129 466.5 393 60.8
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 3.5e-129 465.7 384 61.7
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 4.5e-129 465.3 393 60.6
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 2.5e-127 459.5 388 63.7
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 1.6e-126 456.8 389 63.0
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 3.6e-126 455.7 391 61.9
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 4.7e-126 455.3 389 63.2
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.8e-125 453.4 429 56.6
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 3.0e-125 452.6 425 55.3
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 1.2e-124 450.7 384 59.4
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 1.7e-123 446.8 386 61.7
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 2.7e-121 439.5 372 60.5
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 3.5e-121 439.1 316 68.0
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.0e-120 437.6 394 57.9
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 2.3e-120 436.4 394 57.4
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 6.1e-118 428.3 392 56.1
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.0e-117 427.6 394 56.1
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 2.6e-116 422.9 400 56.8
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 7.5e-116 421.4 426 56.8
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 2.2e-115 419.9 343 65.6
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 3.7e-115 419.1 390 55.4
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 3.7e-115 419.1 347 60.8
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 6.3e-115 418.3 388 56.2
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.8e-114 416.8 398 57.8
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 6.6e-112 408.3 390 55.9
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.6e-108 396.4 371 55.0
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.2e-107 393.3 386 53.6
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 1.2e-102 377.5 384 51.6
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 2.1e-102 376.7 302 61.9
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 6.0e-97 358.6 265 73.2
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 2.3e-93 346.7 265 69.8
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 4.9e-83 312.4 200 75.0
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.9e-80 302.8 383 46.2
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.4e-77 294.3 383 46.0
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 1.8e-77 293.9 278 54.7
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 3.4e-76 289.7 235 64.3
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 2.9e-75 286.6 351 48.1
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 1.1e-74 284.6 387 40.8
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 5.8e-68 262.3 232 60.3
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 7.9e-65 251.9 317 46.4
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 4.8e-62 242.7 331 40.5
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 7.9e-57 225.3 152 65.1
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.2e-49 201.4 208 49.0
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.4e-45 188.0 152 65.8
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 9.0e-45 185.3 237 42.2
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 3.0e-40 170.2 359 32.9
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 2.5e-39 167.2 192 53.6
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 8.2e-38 162.2 119 70.6
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 5.3e-37 159.5 124 65.3
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 4.2e-26 123.2 345 30.4
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 4.4e-23 113.2 331 27.5
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 1.4e-16 91.7 128 40.6
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 7.5e-15 85.9 62 66.1
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-14 84.0 140 36.4
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 4.7e-09 66.6 78 50.0
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 8.0e-09 65.9 179 31.3
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-08 64.7 58 44.8


User provided reference genes

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