Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 5.6e-147 524.2 264 100.0
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.6e-117 426.4 267 83.9
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 3.3e-115 418.7 267 82.0
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 2.2e-111 406.0 262 82.8
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 3.4e-83 312.4 276 64.9
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 1.2e-80 303.9 279 65.2
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 2.0e-80 303.1 279 65.2
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 4.5e-80 302.0 278 66.2
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 3.8e-79 298.9 284 66.5
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 6.6e-79 298.1 291 63.9
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 3.3e-78 295.8 286 65.7
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 3.3e-78 295.8 292 64.4
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 1.6e-77 293.5 284 64.4
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 2.3e-76 289.7 286 62.6
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 2.3e-76 289.7 285 65.6
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 6.8e-76 288.1 279 62.7
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 1.5e-75 287.0 296 61.1
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 2.6e-75 286.2 277 63.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 6.4e-74 281.6 285 64.2
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 9.2e-73 277.7 280 62.1
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.2e-72 277.3 284 62.0
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 2.7e-72 276.2 280 62.5
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 4.6e-72 275.4 281 62.3
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 7.8e-72 274.6 292 59.6
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 8.6e-71 271.2 276 60.5
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 8.6e-71 271.2 283 61.1
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 1.1e-70 270.8 284 61.6
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.5e-70 270.4 276 59.8
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 3.3e-70 269.2 285 57.5
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 4.3e-70 268.9 276 59.4
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 4.3e-70 268.9 267 61.8
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 7.3e-70 268.1 281 61.2
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 1.2e-69 267.3 278 61.2
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 2.1e-69 266.5 280 61.1
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 3.6e-69 265.8 288 58.7
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 6.2e-69 265.0 282 58.5
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 8.0e-69 264.6 282 58.5
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 1.8e-68 263.5 284 60.6
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 1.8e-68 263.5 312 56.1
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 5.2e-68 261.9 277 60.3
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.5e-67 260.4 276 58.0
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 3.4e-67 259.2 290 58.6
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 5.8e-67 258.5 280 61.4
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 1.9e-65 253.4 276 58.7
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 5.4e-65 251.9 284 56.0
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 9.2e-65 251.1 287 56.8
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 1.2e-64 250.8 278 58.6
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 3.9e-63 245.7 276 55.8
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 5.0e-63 245.4 286 54.9
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 1.1e-62 244.2 304 56.2
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 8.1e-61 238.0 278 56.5
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 6.8e-60 235.0 292 53.8
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 8.9e-60 234.6 270 57.0
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 5.8e-59 231.9 284 56.0
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 5.4e-57 225.3 281 53.4
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 5.4e-57 225.3 272 54.0
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 5.4e-57 225.3 282 54.3
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 5.4e-57 225.3 279 52.7
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 2.1e-56 223.4 246 57.3
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 2.7e-56 223.0 282 53.5
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 3.5e-56 222.6 292 53.4
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 6.0e-56 221.9 286 52.4
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 1.3e-55 220.7 267 54.3
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 2.3e-55 219.9 298 52.3
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 3.0e-55 219.5 276 53.3
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 3.0e-55 219.5 277 53.4
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 5.1e-55 218.8 271 53.1
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 5.1e-55 218.8 279 52.3
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 1.5e-54 217.2 272 54.4
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 1.5e-54 217.2 247 57.1
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.9e-54 216.9 274 53.6
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 5.6e-54 215.3 293 49.8
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 7.3e-54 214.9 279 51.3
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 1.6e-53 213.8 286 51.0
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 3.6e-53 212.6 280 51.4
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 1.4e-52 210.7 274 51.1
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 1.4e-52 210.7 274 51.1
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 4.0e-52 209.1 270 50.7
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 1.5e-51 207.2 274 51.1
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 2.6e-51 206.5 274 50.4
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 5.8e-51 205.3 293 49.8
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 7.6e-51 204.9 268 51.5
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 1.3e-50 204.1 280 53.6
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.7e-50 203.8 209 62.2
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 2.9e-50 203.0 302 50.0
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 1.9e-49 200.3 274 51.1
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 4.1e-49 199.1 256 55.1
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 7.1e-49 198.4 258 51.2
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 4.6e-48 195.7 273 54.6
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 7.8e-48 194.9 253 54.2
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 3.6e-45 186.0 279 47.3
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 8.9e-44 181.4 250 51.6
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 3.4e-43 179.5 245 51.8
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 3.8e-42 176.0 224 51.8
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 5.4e-41 172.2 227 55.1
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 6.0e-40 168.7 254 49.6
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 3.0e-39 166.4 274 45.6
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 9.6e-38 161.4 180 58.3
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 2.8e-37 159.8 173 59.0
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 2.4e-36 156.8 245 46.5
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 2.4e-36 156.8 335 38.8
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 3.1e-36 156.4 268 45.1
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 5.3e-36 155.6 230 49.1
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.1e-30 137.9 234 46.2
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 1.5e-30 137.5 246 43.5
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 3.6e-29 132.9 179 54.7
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 4.6e-24 115.9 245 40.8
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 4.6e-24 115.9 244 39.8
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 3.9e-23 112.8 91 64.8
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.9e-22 110.5 112 63.4
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 9.0e-20 101.7 235 39.1
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 8.7e-15 85.1 203 37.9
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 3.3e-14 83.2 81 54.3
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 1.6e-13 80.9 73 56.2
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 7.6e-11 72.0 70 50.0
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 2.2e-10 70.5 79 44.3
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 2.2e-10 70.5 79 44.3
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 1.4e-09 67.8 54 57.4
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 1.4e-09 67.8 54 57.4
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 1.9e-09 67.4 54 57.4
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 3.2e-09 66.6 54 55.6
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 9.3e-09 65.1 38 71.1
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 1.2e-08 64.7 42 69.0
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 3.6e-08 63.2 38 68.4
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 3.6e-08 63.2 54 53.7
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 4.6e-08 62.8 38 68.4
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 6.1e-08 62.4 139 34.5
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 1.0e-07 61.6 38 68.4
Haze_04933 Corylus avellana HOM05D002674 ORTHO05D007700 1.1e-06 58.2 36 80.6
VMungo0720G2130 Vigna mungo HOM05D002674 ORTHO05D007700 7.4e-06 55.5 36 75.0


User provided reference genes

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