Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 4.0e-72 274.6 135 100.0
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 5.6e-66 254.2 136 93.4
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.3e-51 206.5 121 81.8
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 2.3e-51 205.7 121 81.8
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 3.9e-51 204.9 135 74.1
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 5.0e-51 204.5 123 80.5
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.1e-50 203.4 123 80.5
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.5e-50 203.0 123 80.5
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 1.5e-50 203.0 134 72.4
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 2.5e-50 202.2 124 79.8
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 2.5e-50 202.2 119 81.5
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 3.3e-50 201.8 120 80.8
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 5.6e-50 201.1 119 79.8
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 7.3e-50 200.7 119 79.8
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 7.3e-50 200.7 125 79.2
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 9.5e-50 200.3 135 74.1
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 9.5e-50 200.3 122 79.5
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 2.1e-49 199.1 120 79.2
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 2.1e-49 199.1 118 79.7
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 3.6e-49 198.4 123 78.9
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 6.2e-49 197.6 120 76.7
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 6.2e-49 197.6 120 80.8
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 8.1e-49 197.2 117 79.5
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 8.1e-49 197.2 126 75.4
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 1.1e-48 196.8 117 80.3
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.1e-48 196.8 117 80.3
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 4.0e-48 194.9 135 71.9
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 5.2e-48 194.5 117 78.6
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 6.8e-48 194.1 124 75.8
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 8.9e-48 193.7 116 78.4
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 8.9e-48 193.7 119 77.3
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.2e-47 193.4 127 72.4
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 1.2e-47 193.4 120 75.8
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 1.2e-47 193.4 124 76.6
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 3.4e-47 191.8 128 71.9
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 3.4e-47 191.8 135 71.1
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 7.5e-47 190.7 127 71.7
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 9.8e-47 190.3 135 70.4
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.7e-46 189.5 127 70.9
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 3.7e-46 188.3 119 76.5
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 8.3e-46 187.2 124 75.0
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 1.1e-45 186.8 121 70.2
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 2.4e-45 185.7 120 72.5
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 3.2e-45 185.3 123 72.4
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 5.4e-45 184.5 120 70.8
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 9.2e-45 183.7 124 74.2
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.2e-44 183.3 120 70.0
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 2.7e-44 182.2 121 67.8
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 2.7e-44 182.2 135 68.1
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 6.0e-44 181.0 122 68.9
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 6.0e-44 181.0 120 74.2
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 7.8e-44 180.6 126 70.6
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 7.8e-44 180.6 119 71.4
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 7.8e-44 180.6 138 68.1
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 1.0e-43 180.3 117 69.2
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 1.3e-43 179.9 117 69.2
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 1.7e-43 179.5 121 66.9
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.7e-43 179.5 151 62.3
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 3.0e-43 178.7 121 70.2
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 3.0e-43 178.7 119 67.2
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 6.6e-43 177.6 119 67.2
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 6.6e-43 177.6 119 67.2
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 6.6e-43 177.6 119 67.2
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 6.6e-43 177.6 119 67.2
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 6.6e-43 177.6 122 69.7
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 8.6e-43 177.2 121 65.3
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 1.6e-41 172.9 141 61.7
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 2.1e-41 172.6 127 66.1
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 6.2e-41 171.0 121 63.6
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.1e-40 170.2 103 79.6
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.1e-40 168.7 98 80.6
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 4.0e-40 168.3 122 66.4
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 4.4e-39 164.9 133 60.9
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 5.8e-39 164.5 123 68.3
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 1.7e-38 162.9 98 78.6
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.9e-38 162.2 126 61.1
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 6.4e-38 161.0 126 66.7
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 1.9e-37 159.5 120 65.0
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 1.9e-37 159.5 127 63.8
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 1.3e-35 153.3 116 63.8
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 6.6e-35 151.0 135 59.3
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 3.6e-33 145.2 114 62.3
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 5.4e-29 131.3 79 78.5
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.6e-28 129.8 80 77.5
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 6.0e-28 127.9 122 52.5
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 6.0e-28 127.9 80 75.0
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 4.8e-25 118.2 115 50.4
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 4.5e-23 111.7 119 47.1
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 2.2e-22 109.4 92 62.0
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 6.0e-20 101.3 59 78.0
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 3.3e-18 95.5 82 63.4
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 4.3e-18 95.1 112 46.4
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.1e-13 80.5 85 50.6
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 7.1e-13 77.8 104 42.3
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 1.1e-08 63.9 93 43.0
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.1e-08 63.9 44 68.2


User provided reference genes

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