Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 3.3e-237 824.7 437 100.0
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 6.7e-222 773.9 437 92.9
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 1.7e-156 556.6 439 66.7
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 2.3e-153 546.2 438 66.7
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 6.2e-151 538.1 436 65.8
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.4e-150 537.0 435 66.0
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 8.4e-148 527.7 437 65.2
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 9.3e-147 524.2 439 63.6
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 3.5e-146 522.3 434 65.0
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 3.5e-146 522.3 434 65.0
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 6.0e-146 521.5 439 63.1
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 1.5e-144 516.9 436 63.8
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.3e-143 513.8 436 62.6
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 7.9e-138 494.6 433 61.9
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 5.1e-137 491.9 436 60.8
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 4.3e-136 488.8 444 59.7
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 4.8e-135 485.3 424 60.1
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 1.4e-134 483.8 421 63.9
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 5.3e-134 481.9 415 61.2
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 6.9e-134 481.5 437 61.3
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 4.5e-133 478.8 410 62.2
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 1.3e-132 477.2 432 60.0
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 8.5e-132 474.6 436 58.9
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 8.5e-132 474.6 431 58.2
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 1.4e-131 473.8 406 61.3
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 9.4e-131 471.1 438 57.3
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 3.6e-130 469.2 438 57.3
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 4.6e-130 468.8 435 58.4
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 2.0e-128 463.4 438 56.8
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 2.0e-128 463.4 436 57.3
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 2.5e-128 463.0 438 56.8
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 5.7e-128 461.8 433 56.1
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 7.4e-128 461.5 408 60.5
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 7.4e-128 461.5 443 56.9
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 9.7e-128 461.1 433 56.4
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 9.7e-128 461.1 438 56.8
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 1.7e-127 460.3 440 58.6
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 1.7e-127 460.3 440 57.0
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 2.2e-127 459.9 438 57.3
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 2.2e-127 459.9 418 58.9
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 8.2e-127 458.0 418 58.1
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 1.1e-126 457.6 427 55.3
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 4.1e-126 455.7 427 55.0
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 5.3e-126 455.3 438 54.8
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 3.4e-125 452.6 439 59.0
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 4.5e-125 452.2 438 55.3
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 4.5e-125 452.2 407 56.8
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 2.2e-124 449.9 435 54.5
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 1.2e-122 444.1 438 54.3
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 1.0e-121 441.0 438 54.1
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 3.3e-120 436.0 427 56.2
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.4e-120 435.6 431 52.4
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 7.4e-120 434.9 405 57.3
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 3.1e-118 429.5 434 53.9
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 5.3e-118 428.7 436 53.4
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 1.5e-117 427.2 433 53.6
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 7.7e-117 424.9 416 55.0
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 2.9e-116 422.9 436 53.0
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 8.5e-116 421.4 356 66.9
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.5e-115 418.7 447 51.9
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 6.1e-114 415.2 447 51.7
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 1.4e-113 414.1 438 52.7
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 1.8e-113 413.7 354 59.3
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 8.8e-113 411.4 442 51.8
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 4.4e-112 409.1 432 51.2
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.3e-111 407.5 446 50.7
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 4.8e-111 405.6 447 50.8
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 1.8e-110 403.7 409 54.8
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.6e-109 400.6 408 51.7
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 5.9e-109 398.7 408 52.0
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 1.0e-108 397.9 409 52.8
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 6.5e-108 395.2 469 48.4
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 1.2e-106 391.0 352 62.8
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 6.1e-106 388.7 401 52.4
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 8.0e-106 388.3 413 51.3
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 1.4e-105 387.5 443 50.8
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 6.8e-105 385.2 300 64.7
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 6.8e-105 385.2 406 53.0
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 9.7e-104 381.3 406 50.7
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 2.8e-103 379.8 358 54.5
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 3.5e-101 372.9 421 48.7
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 3.8e-100 369.4 426 49.1
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 1.8e-97 360.5 440 46.1
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 1.7e-95 354.0 340 59.7
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 3.1e-94 349.7 414 48.3
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 1.2e-88 331.3 422 45.5
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 1.5e-88 330.9 393 47.3
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 5.9e-85 318.9 373 47.5
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 4.3e-83 312.8 348 53.7
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 2.6e-80 303.5 271 55.0
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.2e-79 300.4 408 43.9
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 1.1e-73 281.6 297 54.2
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 2.9e-71 273.5 422 37.0
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 3.0e-68 263.5 395 40.5
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 2.3e-65 253.8 366 41.5
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 1.9e-62 244.2 387 35.4
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 3.9e-60 236.5 211 55.5
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 1.2e-56 224.9 427 33.5
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 9.9e-56 221.9 231 52.4
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 1.7e-52 211.1 194 52.1
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 3.4e-40 170.2 207 50.7
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 1.9e-30 137.9 85 71.8
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 1.6e-29 134.8 194 39.2
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.5e-19 100.9 108 48.1
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.3e-19 100.1 65 61.5
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.7e-18 97.1 65 63.1
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.1e-17 95.5 57 64.9
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 5.0e-15 86.7 204 33.3
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 7.7e-08 62.8 110 41.8
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.7e-07 61.6 34 73.5
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 2.2e-07 61.2 75 53.3


User provided reference genes

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