Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 0.0e+00 1239.2 642 100.0
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 0.0e+00 1137.5 640 93.4
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 0.0e+00 1092.0 637 89.6
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 7.2e-305 1050.0 622 88.6
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 8.0e-272 940.3 640 78.4
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 3.6e-248 861.7 647 71.1
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 1.4e-244 849.7 649 71.2
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 9.5e-241 837.0 609 71.8
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 8.1e-240 833.9 643 70.9
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.6e-238 828.9 641 69.1
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 2.2e-237 825.9 637 66.6
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 9.2e-236 820.5 656 69.4
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 1.2e-235 820.1 582 72.7
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.1e-227 792.7 648 68.8
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 1.0e-226 790.4 641 67.2
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.0e-226 790.4 648 68.2
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 1.1e-225 786.9 648 68.4
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 1.3e-224 783.5 645 65.6
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 2.1e-224 782.7 645 65.6
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 2.2e-221 772.7 627 66.0
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 1.1e-220 770.4 644 64.8
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 5.4e-220 768.1 640 64.7
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.3e-218 763.5 641 66.3
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 8.1e-216 754.2 640 63.3
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 1.1e-215 753.8 645 62.9
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 1.4e-215 753.4 688 60.5
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 9.9e-214 747.3 648 63.9
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 2.9e-213 745.7 653 62.9
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 1.1e-212 743.8 641 64.3
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 2.4e-212 742.7 677 61.4
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 5.5e-212 741.5 677 61.3
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 2.7e-211 739.2 643 63.3
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 1.3e-210 736.9 652 63.7
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 1.3e-208 730.3 581 65.9
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 2.1e-208 729.6 646 63.6
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 6.2e-208 728.0 642 62.8
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 1.5e-206 723.4 647 62.6
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 5.8e-206 721.5 651 63.4
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 2.5e-204 716.1 664 57.5
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 4.2e-204 715.3 641 62.6
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 5.5e-204 714.9 648 63.6
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.6e-203 713.4 641 59.9
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 2.7e-203 712.6 641 59.1
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 2.7e-203 712.6 607 61.1
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 2.7e-203 712.6 651 61.3
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 7.9e-203 711.1 650 61.2
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 5.1e-202 708.4 639 59.0
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 8.7e-202 707.6 654 60.7
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.9e-201 706.4 646 60.1
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 4.3e-201 705.3 646 62.4
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 4.8e-200 701.8 643 62.5
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 8.2e-200 701.0 646 61.1
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 1.4e-199 700.3 646 61.0
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 4.1e-199 698.7 661 58.7
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 9.0e-199 697.6 641 62.7
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.5e-198 696.8 636 62.4
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 1.5e-198 696.8 636 62.4
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 1.5e-198 696.8 647 60.9
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 2.0e-198 696.4 644 61.3
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 3.2e-196 689.1 644 59.8
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.2e-196 688.7 644 60.4
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.2e-196 688.7 644 60.4
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 5.5e-196 688.3 648 59.7
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 6.1e-195 684.9 649 60.1
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 7.9e-195 684.5 657 58.6
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.0e-194 684.1 646 59.8
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 1.8e-194 683.3 665 57.3
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 3.0e-194 682.6 644 57.3
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 5.1e-194 681.8 635 59.1
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 2.5e-193 679.5 634 58.0
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 4.3e-193 678.7 650 57.8
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 1.3e-192 677.2 647 60.4
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.2e-192 676.4 625 57.6
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.8e-192 676.0 641 59.0
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 6.3e-192 674.9 634 60.6
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 6.3e-192 674.9 647 59.0
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 8.2e-192 674.5 633 58.3
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 4.1e-191 672.2 645 56.0
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 5.3e-191 671.8 633 57.8
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 1.2e-190 670.6 643 58.6
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 5.9e-190 668.3 643 58.6
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 2.9e-189 666.0 647 57.3
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 3.8e-189 665.6 643 57.7
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 3.8e-189 665.6 643 58.2
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 6.5e-189 664.8 655 58.6
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 4.6e-187 658.7 436 73.9
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 6.3e-184 648.3 546 64.8
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 6.9e-183 644.8 620 56.9
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-180 637.5 467 66.4
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 2.5e-180 636.3 630 57.5
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 4.2e-180 635.6 645 56.7
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 9.4e-180 634.4 639 56.2
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.8e-178 630.2 632 54.0
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 6.5e-173 611.7 641 53.0
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 4.0e-170 602.4 645 54.3
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.7e-168 597.0 632 53.8
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 1.6e-166 590.5 649 52.4
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.5e-156 557.4 393 68.4
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 2.3e-154 550.1 348 75.9
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 9.8e-153 544.7 639 53.1
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 4.3e-140 502.7 352 69.9
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 8.6e-133 478.4 527 50.3
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 8.1e-123 445.3 462 49.8
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 9.2e-119 431.8 645 40.5
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 6.4e-112 409.1 420 49.3
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 4.2e-111 406.4 596 41.8
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 5.6e-108 396.0 488 44.5
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 1.4e-82 311.6 567 36.0
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 1.1e-76 292.0 665 30.8
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 6.5e-56 223.0 537 31.1
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 8.2e-51 206.1 430 32.8
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 2.4e-50 204.5 493 28.6
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 7.5e-28 129.8 100 62.0
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 7.5e-28 129.8 100 62.0
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 5.4e-26 123.6 104 58.7
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.1e-15 89.4 421 22.1


User provided reference genes

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