Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 1.4e-118 429.9 253 100.0
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 4.5e-93 345.1 250 79.2
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 3.6e-66 255.8 263 64.3
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 3.8e-60 235.7 274 61.7
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 6.3e-55 218.4 263 49.0
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 1.4e-54 217.2 270 52.6
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 3.1e-54 216.1 274 47.4
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 4.2e-51 205.7 274 58.8
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 1.2e-50 204.1 271 56.8
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 4.4e-48 195.7 267 44.9
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 4.4e-48 195.7 267 44.9
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 9.8e-48 194.5 263 46.8
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 4.9e-47 192.2 256 59.0
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 4.9e-47 192.2 268 44.4
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 8.3e-47 191.4 270 43.7
Sabra14G0075600 Salix brachista HOM05D007199 ORTHO05D007257 4.1e-46 189.1 250 46.8
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.7e-44 183.7 279 49.1
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 2.3e-44 183.3 269 48.7
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 2.3e-44 183.3 278 47.5
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 1.5e-43 180.6 294 48.0
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.5e-43 180.6 250 52.0
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 1.9e-43 180.3 269 48.0
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 3.3e-43 179.5 273 53.8
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 9.5e-43 177.9 250 50.4
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 1.6e-42 177.2 273 42.1
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.6e-42 177.2 269 48.7
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.6e-42 177.2 250 50.0
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 2.1e-42 176.8 262 40.5
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 2.8e-42 176.4 263 45.2
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 4.7e-42 175.6 267 45.3
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 6.1e-42 175.3 272 52.6
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 1.4e-41 174.1 289 39.4
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 3.0e-41 172.9 260 46.2
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 6.8e-41 171.8 268 45.1
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 1.7e-39 167.2 287 44.9
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 1.4e-38 164.1 273 41.4
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 3.2e-38 162.9 262 42.4
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.2e-38 162.9 269 42.8
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.2e-38 162.9 269 42.8
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 5.4e-38 162.2 269 43.1
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 7.0e-38 161.8 289 42.6
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 9.2e-38 161.4 262 42.0
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 1.6e-37 160.6 275 41.1
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 2.0e-37 160.2 269 42.4
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 6.0e-37 158.7 272 41.5
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 1.0e-36 157.9 249 51.4
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 1.3e-36 157.5 249 48.2
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 1.3e-36 157.5 272 37.1
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 1.5e-35 154.1 280 40.7
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 5.6e-35 152.1 269 43.5
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 2.1e-34 150.2 281 48.0
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 3.6e-34 149.4 263 46.8
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 5.2e-33 145.6 280 39.3
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 9.8e-32 141.4 268 38.1
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 9.2e-30 134.8 281 48.0
arahy.Tifrunner.gnm1.ann1.WJU08E Arachis hypogaea HOM05D007199 ORTHO05D007257 2.0e-29 133.7 231 45.0
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 2.3e-28 130.2 252 39.7
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 1.1e-27 127.9 269 37.2
arahy.Tifrunner.gnm1.ann1.GEK5Z0 Arachis hypogaea HOM05D007199 ORTHO05D007257 2.5e-27 126.7 229 43.2
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 2.5e-27 126.7 238 44.1
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 4.3e-27 125.9 260 41.2
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 5.6e-27 125.6 255 45.9
arahy.Tifrunner.gnm1.ann1.A7IBVM Arachis hypogaea HOM05D007199 ORTHO05D007257 1.4e-25 120.9 301 32.6
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 1.4e-25 120.9 269 35.7
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 4.0e-25 119.4 252 42.5
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 4.0e-25 119.4 243 38.3
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 5.2e-25 119.0 246 44.3
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 1.5e-24 117.5 236 45.3
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 4.4e-24 115.9 264 37.1
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 1.3e-23 114.4 261 35.6
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 1.3e-23 114.4 264 37.9
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 2.9e-23 113.2 255 33.7
Lj9C602T4 Lonicera japonica HOM05D007199 ORTHO05D007257 1.9e-22 110.5 239 34.7
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 1.9e-22 110.5 248 38.3
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 5.4e-22 109.0 291 42.3
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 2.1e-21 107.1 263 32.3
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 6.0e-21 105.5 266 33.8
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 5.1e-20 102.4 270 33.7
BcaB01g03200 Brassica carinata HOM05D012720 ORTHO05D007257 1.1e-19 101.3 270 34.1
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 1.5e-19 100.9 259 32.0
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 2.5e-19 100.1 265 35.5
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 4.3e-19 99.4 268 34.3
Oeu022158.1 Olea europaea HOM05D007199 ORTHO05D007257 4.3e-19 99.4 227 41.4
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 5.6e-19 99.0 268 35.4
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 5.6e-19 99.0 251 35.9
BcaC02g12658 Brassica carinata HOM05D012720 ORTHO05D007257 1.6e-18 97.4 277 35.0
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 3.6e-18 96.3 282 32.6
BolC4t21784H Brassica oleracea HOM05D012720 ORTHO05D007257 6.2e-18 95.5 275 34.2
AUR62008640 Chenopodium quinoa HOM05D021513 ORTHO05D007257 6.2e-18 95.5 259 32.8
COL.COLO4_06259 Corchorus olitorius HOM05D007199 ORTHO05D007257 1.1e-17 94.7 116 50.0
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 1.4e-17 94.4 276 32.2
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 2.4e-17 93.6 258 34.9
BraA05t19115Z Brassica rapa HOM05D012720 ORTHO05D007257 3.1e-17 93.2 273 32.2
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 8.9e-17 91.7 264 34.1
Sp4g28690 Schrenkiella parvula HOM05D012720 ORTHO05D007257 1.2e-16 91.3 279 31.9
ECA236G3069 Erigeron canadensis HOM05D007199 ORTHO05D007257 3.4e-16 89.7 291 28.9
Actinidia25657 Actinidia chinensis HOM05D007199 ORTHO05D007257 8.4e-15 85.1 137 40.9
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 1.1e-14 84.7 258 30.2
Carub.0004s2935 Capsella rubella HOM05D012720 ORTHO05D007257 1.9e-14 84.0 248 33.1
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 1.9e-14 84.0 270 31.9
AUR62033124 Chenopodium quinoa HOM05D021513 ORTHO05D007257 7.1e-14 82.0 240 30.8
Nitab4.5_0000917g0050 Nicotiana tabacum HOM05D007199 ORTHO05D007257 9.2e-14 81.6 182 35.7
vmacro12588 Vaccinium macrocarpon HOM05D007199 ORTHO05D007257 2.1e-13 80.5 131 44.3
CDE11G0583 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 2.7e-13 80.1 279 29.7
CDE09G0027 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 4.6e-13 79.3 278 30.2
EL10Ac1g00217 Beta vulgaris HOM05D021513 ORTHO05D007257 6.0e-13 79.0 285 31.6
Aqoxy5G04262 Aquilegia oxysepala HOM05D007199 ORTHO05D007257 7.8e-13 78.6 261 31.8
SalBow5G5634 Salvia bowleyana HOM05D007199 ORTHO05D007257 7.8e-13 78.6 256 30.1
C04p01310 Brassica napus HOM05D012720 ORTHO05D007257 1.3e-12 77.8 264 33.0
BcaC02g07047 Brassica carinata HOM05D012720 ORTHO05D007257 8.7e-12 75.1 249 32.9
Ah.15g093270 Amaranthus hybridus HOM05D021513 ORTHO05D007257 1.1e-11 74.7 221 30.8
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 1.1e-11 74.7 232 31.9
EL10Ac7g17504 Beta vulgaris HOM05D021513 ORTHO05D007257 4.3e-11 72.8 228 37.3
MBI12_g13712_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 5.6e-11 72.4 265 29.4
PGR042G0368 Punica granatum HOM05D007199 ORTHO05D007257 1.2e-10 71.2 324 34.6
ATR0620G133 Amborella trichopoda HOM05D007199 ORTHO05D007257 1.6e-10 70.9 246 30.1
DCAR_006984 Daucus carota HOM05D007199 ORTHO05D007257 6.2e-10 68.9 265 28.3
HanXRQChr16g0524641 Helianthus annuus HOM05D007199 ORTHO05D007257 1.1e-09 68.2 253 30.4
Cc02_g39760 Coffea canephora HOM05D007199 ORTHO05D007257 4.0e-09 66.2 321 37.1
MBI04_g33415_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 6.9e-09 65.5 150 36.0
Hund16734 Selenicereus undatus HOM05D007199 ORTHO05D007257 2.6e-08 63.5 233 27.5
Gorai.008G127500 Gossypium raimondii HOM05D007199 ORTHO05D007257 7.6e-08 62.0 119 36.1
Sc23g0001940 Simmondsia chinensis HOM05D007199 ORTHO05D007257 7.6e-08 62.0 252 33.3
CDE02G0206 Ceratophyllum demersum HOM05D056078 ORTHO05D007257 1.3e-07 61.2 264 24.6


User provided reference genes

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