Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 0.0e+00 1226.8 652 100.0
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 5.4e-300 1033.9 655 84.3
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.6e-272 942.6 578 86.7
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 6.9e-255 884.0 645 73.3
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.2e-245 852.4 645 71.6
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 5.0e-245 851.3 651 71.6
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 1.4e-244 849.7 652 69.6
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 6.1e-243 844.3 655 69.9
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.0e-242 843.6 653 68.9
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 6.7e-242 840.9 651 70.5
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 3.3e-241 838.6 651 69.7
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 6.9e-239 830.9 651 71.0
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.2e-238 830.1 679 67.0
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.0e-238 829.3 651 70.8
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 2.6e-238 828.9 679 66.4
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 6.5e-237 824.3 652 68.6
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 1.2e-235 820.1 663 66.4
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 3.6e-235 818.5 648 66.8
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 3.9e-234 815.1 659 70.1
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 2.0e-233 812.8 648 66.7
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.3e-232 810.1 655 68.4
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 7.0e-231 804.3 653 67.4
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 6.5e-229 797.7 651 66.1
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.1e-228 797.0 652 66.4
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.5e-228 796.6 680 64.7
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 2.1e-227 792.7 649 66.1
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 4.7e-227 791.6 656 68.1
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.1e-227 791.2 653 65.5
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 5.2e-226 788.1 671 65.1
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.7e-226 787.7 653 64.9
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 6.7e-226 787.7 671 65.4
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-225 786.9 651 65.0
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 4.4e-225 785.0 669 64.4
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 2.0e-222 776.2 680 63.8
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 2.2e-221 772.7 651 65.7
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 8.5e-221 770.8 658 64.6
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 8.5e-221 770.8 655 65.0
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 1.2e-219 766.9 646 64.9
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 8.0e-219 764.2 673 62.4
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 1.4e-218 763.5 662 61.0
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 2.3e-218 762.7 644 64.6
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 3.0e-218 762.3 652 64.6
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 2.0e-217 759.6 657 63.2
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 2.6e-217 759.2 666 63.1
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 5.7e-217 758.1 675 62.4
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 2.8e-216 755.7 673 62.4
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 3.1e-215 752.3 673 61.8
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 4.1e-215 751.9 653 62.6
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 7.0e-215 751.1 673 62.0
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.0e-214 749.6 652 64.6
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 2.7e-214 749.2 644 62.4
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 4.5e-214 748.4 658 62.9
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 1.0e-213 747.3 661 62.5
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 2.7e-211 739.2 649 64.3
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 3.0e-210 735.7 675 61.0
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 8.8e-210 734.2 649 61.5
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 2.6e-209 732.6 662 60.6
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 7.5e-209 731.1 661 61.7
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 7.5e-209 731.1 661 61.7
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 3.7e-208 728.8 674 61.1
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 4.9e-208 728.4 673 60.5
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 4.1e-207 725.3 673 60.5
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 5.4e-207 724.9 603 65.8
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.0e-206 723.0 674 58.6
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 8.6e-205 717.6 659 59.0
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 3.3e-204 715.7 673 60.3
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 4.2e-204 715.3 661 58.9
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 7.2e-204 714.5 651 61.9
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 9.5e-204 714.1 657 62.3
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 9.5e-204 714.1 678 59.7
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 6.1e-203 711.4 628 61.9
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 1.4e-202 710.3 661 59.0
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 6.8e-202 708.0 653 62.5
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 5.4e-199 698.4 655 62.1
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 3.9e-197 692.2 640 60.3
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 6.6e-197 691.4 630 60.0
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 2.1e-195 686.4 654 61.0
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.7e-192 676.8 656 57.9
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.9e-192 676.0 658 56.8
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 3.2e-191 672.5 646 57.9
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 7.0e-191 671.4 622 60.6
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 9.2e-191 671.0 650 57.5
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 2.0e-190 669.8 639 60.3
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.2e-187 660.6 679 55.4
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 4.4e-185 652.1 680 55.4
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 1.7e-184 650.2 680 54.1
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 2.2e-184 649.8 679 54.9
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 2.2e-184 649.8 671 58.1
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 4.9e-184 648.7 679 54.1
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.1e-183 647.5 677 53.6
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.1e-182 643.3 658 55.5
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 3.6e-179 632.5 684 53.1
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 4.4e-177 625.5 681 54.2
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 2.9e-176 622.9 473 71.9
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 7.1e-175 618.2 681 53.5
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 2.7e-174 616.3 679 53.5
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 1.3e-173 614.0 686 51.9
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 2.3e-173 613.2 679 53.0
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 9.3e-159 564.7 619 53.0
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.8e-133 480.7 705 43.3
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 2.4e-130 470.3 682 42.5
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 9.4e-127 458.4 656 45.7
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 3.6e-126 456.4 561 49.4
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 1.8e-125 454.1 628 45.1
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 4.3e-124 449.5 308 77.3
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 4.3e-124 449.5 368 71.5
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 5.5e-119 432.6 703 38.8
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 2.7e-118 430.3 650 40.3
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 5.9e-105 386.0 376 56.6
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 4.2e-103 379.8 338 59.5
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 5.2e-101 372.9 316 63.9
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 1.6e-81 308.1 244 66.0
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.9e-71 274.6 609 32.2
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 5.1e-56 223.4 245 53.1
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 9.3e-50 202.6 320 43.8
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 2.7e-49 201.1 359 39.0
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 2.1e-46 191.4 256 47.7
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.9e-43 180.3 227 44.9
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 5.5e-18 97.1 182 36.3
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 3.1e-13 81.3 88 50.0
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.9e-11 74.7 121 42.1
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 7.9e-09 66.6 231 27.3
A06p28820 Brassica napus HOM05D003696 ORTHO05D016804 3.7e-06 57.8 162 34.0


User provided reference genes

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