Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G159100 Populus trichocarpa HOM05D006065 ORTHO05D007672 9.0e-58 226.9 128 100.0
Sabra02G0126300 Salix brachista HOM05D006065 ORTHO05D007672 1.1e-23 113.6 88 80.7
Potri.014G083100 Populus trichocarpa HOM05D006065 ORTHO05D007672 5.5e-23 111.3 93 77.4
Sabra14G0060500 Salix brachista HOM05D006065 ORTHO05D007672 2.6e-20 102.4 103 71.8
Manes.05G035300 Manihot esculenta HOM05D006065 ORTHO05D007672 2.6e-12 75.9 86 48.8
Thecc.01G360200 Theobroma cacao HOM05D006065 ORTHO05D007672 7.5e-12 74.3 53 69.8
Gohir.A08G131000 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.3e-11 73.6 53 66.0
Gorai.004G158400 Gossypium raimondii HOM05D006065 ORTHO05D007672 1.7e-11 73.2 53 66.0
Ciclev10022632m.g Citrus clementina HOM05D006065 ORTHO05D007672 2.8e-11 72.4 54 66.7
Gohir.D08G152500 Gossypium hirsutum HOM05D006065 ORTHO05D007672 4.8e-11 71.6 53 64.2
Dinv32472 Davidia involucrata HOM05D006065 ORTHO05D007672 6.3e-11 71.2 59 61.0
Manes.01G258100 Manihot esculenta HOM05D006065 ORTHO05D007672 6.3e-11 71.2 88 58.0
Rhsim07G0016100 Rhododendron simsii HOM05D006065 ORTHO05D007672 8.3e-11 70.9 69 53.6
Nn1g01520 Nelumbo nucifera HOM05D006065 ORTHO05D007672 2.4e-10 69.3 58 58.6
Atru.chr5.461 Acer truncatum HOM05D006065 ORTHO05D007672 3.1e-10 68.9 93 43.0
COL.COLO4_12704 Corchorus olitorius HOM05D006065 ORTHO05D007672 5.4e-10 68.2 89 48.3
Dinv43807 Davidia involucrata HOM05D006065 ORTHO05D007672 5.4e-10 68.2 77 49.4
Actinidia10016 Actinidia chinensis HOM05D006065 ORTHO05D007672 7.0e-10 67.8 59 61.0
Cpa.g.sc18.247 Carica papaya HOM05D006065 ORTHO05D007672 1.2e-09 67.0 54 59.3
Duzib138G1923 Durio zibethinus HOM05D006065 ORTHO05D007672 1.2e-09 67.0 53 60.4
Actinidia20914 Actinidia chinensis HOM05D006065 ORTHO05D007672 2.7e-09 65.9 59 57.6
Cfa003936 Carpinus fangiana HOM05D006065 ORTHO05D007672 3.5e-09 65.5 57 61.4
Haze_15490 Corylus avellana HOM05D006065 ORTHO05D007672 7.7e-09 64.3 53 64.2
AT4G00525 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 1.3e-08 63.5 58 60.3
AL6G52950 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 2.2e-08 62.8 58 60.3
Sp6g00560 Schrenkiella parvula HOM05D006065 ORTHO05D007672 2.2e-08 62.8 55 61.8
vmacro13279 Vaccinium macrocarpon HOM05D006065 ORTHO05D007672 2.2e-08 62.8 58 60.3
CANSAT56G3634 Cannabis sativa HOM05D006065 ORTHO05D007672 3.8e-08 62.0 58 51.7
Oeu010611.1 Olea europaea HOM05D006065 ORTHO05D007672 3.8e-08 62.0 54 57.4
THA.LOC104817023 Tarenaya hassleriana HOM05D006065 ORTHO05D007672 3.8e-08 62.0 56 57.1
TAR375G0974 Trochodendron aralioides HOM05D006065 ORTHO05D007672 3.8e-08 62.0 68 44.1
TAR629G3005 Trochodendron aralioides HOM05D006065 ORTHO05D007672 6.5e-08 61.2 54 53.7
Aa31LG5G450 Aethionema arabicum HOM05D006065 ORTHO05D007672 8.5e-08 60.8 48 60.4
Duzib133G1075 Durio zibethinus HOM05D006065 ORTHO05D007672 1.5e-07 60.1 53 62.3
Hma1.2p1_0001F.1_g001420 Hydrangea macrophylla HOM05D006065 ORTHO05D007672 1.9e-07 59.7 55 54.5
PGR031G0376 Punica granatum HOM05D006065 ORTHO05D007672 1.9e-07 59.7 97 39.2
Migut.N01441 Erythranthe guttata HOM05D006065 ORTHO05D007672 3.2e-07 58.9 48 66.7
Prupe.2G168300 Prunus persica HOM05D006065 ORTHO05D007672 3.2e-07 58.9 53 58.5
Hund16927 Selenicereus undatus HOM05D006065 ORTHO05D007672 5.5e-07 58.2 55 58.2
Gohir.A11G088300 Gossypium hirsutum HOM05D006065 ORTHO05D007672 9.4e-07 57.4 54 59.3
Gohir.D11G092600 Gossypium hirsutum HOM05D006065 ORTHO05D007672 9.4e-07 57.4 54 59.3
MSTRG.28221 Avicennia marina HOM05D006065 ORTHO05D007672 1.2e-06 57.0 38 71.1
CARHR248680 Cardamine hirsuta HOM05D006065 ORTHO05D007672 1.6e-06 56.6 52 55.8
CiPaw.01G060100 Carya illinoinensis HOM05D006065 ORTHO05D007672 1.6e-06 56.6 50 56.0
MD07G1138600 Malus domestica HOM05D006065 ORTHO05D007672 1.6e-06 56.6 58 55.2
DCAR_006926 Daucus carota HOM05D006065 ORTHO05D007672 2.1e-06 56.2 51 60.8
HanXRQChr13g0426531 Helianthus annuus HOM05D006065 ORTHO05D007672 3.6e-06 55.5 50 58.0
Thhalv10029047m.g Eutrema salsugineum HOM05D006065 ORTHO05D007672 4.7e-06 55.1 55 52.7
TAR374G1295 Trochodendron aralioides HOM05D006065 ORTHO05D007672 4.7e-06 55.1 58 46.6
GSVIVG01018349001 Vitis vinifera HOM05D006065 ORTHO05D007672 4.7e-06 55.1 48 58.3
GSVIVG01026900001 Vitis vinifera HOM05D006065 ORTHO05D007672 4.7e-06 55.1 48 58.3
RcHm_v2.0_Chr1g0355101 Rosa chinensis HOM05D006065 ORTHO05D007672 6.1e-06 54.7 53 52.8


User provided reference genes

Program Settings