Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 0.0e+00 1309.3 632 100.0
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 0.0e+00 1250.3 632 95.1
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.8e-300 1035.4 646 77.6
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 1.1e-286 989.6 599 77.0
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 1.6e-285 985.7 626 74.1
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.0e-284 981.1 638 73.5
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 5.3e-284 980.7 658 71.6
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 5.3e-284 980.7 576 79.9
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 6.9e-284 980.3 638 73.4
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 1.3e-282 976.1 638 72.7
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.1e-281 973.0 639 72.6
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 5.4e-281 970.7 577 78.2
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 1.6e-280 969.1 580 76.7
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 7.9e-280 966.8 632 72.5
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 1.0e-279 966.5 615 74.1
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 2.3e-279 965.3 575 76.9
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 3.9e-279 964.5 577 77.6
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 1.3e-277 959.5 627 73.0
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 6.9e-276 953.7 596 74.5
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 1.9e-273 945.7 644 70.8
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 5.5e-273 944.1 578 75.4
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 9.3e-273 943.3 648 70.7
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 1.6e-272 942.6 587 74.3
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 2.1e-272 942.2 626 70.9
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 6.0e-272 940.6 698 65.8
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 7.9e-272 940.3 590 74.4
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.3e-271 939.5 580 74.1
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.3e-271 938.7 580 74.1
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 5.1e-271 937.6 599 74.5
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 3.3e-270 934.9 637 71.4
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 1.6e-269 932.6 576 74.1
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 6.2e-269 930.6 575 74.8
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 8.1e-269 930.2 580 74.5
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 1.1e-268 929.9 626 69.6
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 1.1e-268 929.9 575 74.8
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 5.3e-268 927.5 632 69.0
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 2.0e-267 925.6 591 72.1
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 2.6e-267 925.2 584 73.3
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 4.5e-267 924.5 633 70.1
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 4.5e-267 924.5 635 71.2
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 7.6e-267 923.7 573 74.3
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 1.0e-266 923.3 633 70.1
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.0e-266 923.3 643 68.9
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.0e-266 923.3 631 69.6
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 1.0e-266 923.3 615 71.7
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.3e-266 922.9 575 74.3
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.2e-266 922.2 606 71.8
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 6.5e-266 920.6 633 70.0
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.4e-265 919.5 633 70.0
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.9e-265 919.1 578 72.8
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 3.2e-265 918.3 575 73.7
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.2e-265 917.9 574 73.0
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 1.6e-264 916.0 595 72.3
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 2.1e-264 915.6 634 69.4
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 3.5e-264 914.8 648 68.4
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 4.6e-264 914.4 641 68.6
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 4.6e-264 914.4 585 73.0
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 5.1e-263 911.0 598 70.9
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.1e-262 909.8 633 70.0
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 6.3e-261 904.0 608 69.9
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 1.1e-260 903.3 599 71.0
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.0e-259 899.0 575 72.0
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 4.5e-259 897.9 639 68.4
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 2.5e-257 892.1 576 73.8
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 2.5e-257 892.1 615 67.8
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 5.5e-257 891.0 597 70.4
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 2.3e-255 885.6 619 68.0
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 9.7e-254 880.2 556 73.6
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 2.9e-250 868.6 633 68.2
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 3.8e-250 868.2 583 70.3
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 1.1e-249 866.7 594 70.0
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 7.2e-249 864.0 633 67.5
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 2.0e-246 855.9 545 72.8
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 4.8e-245 851.3 611 65.3
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 9.1e-244 847.0 615 66.7
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 4.2e-241 838.2 603 66.7
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 1.2e-240 836.6 609 67.3
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 2.1e-240 835.9 614 66.9
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 3.3e-238 828.6 599 67.6
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 9.7e-238 827.0 577 68.1
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.7e-237 826.2 610 66.9
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.7e-237 826.2 610 66.9
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.8e-236 822.8 573 66.5
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 7.0e-236 820.8 608 66.4
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 4.2e-233 811.6 555 69.5
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 7.2e-233 810.8 591 67.3
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 4.7e-232 808.1 626 61.7
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 4.0e-231 805.1 621 65.2
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 1.5e-225 786.6 642 61.1
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 1.1e-220 770.4 636 61.8
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 3.8e-218 761.9 573 64.0
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 3.6e-208 728.8 580 59.7
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 9.2e-196 687.6 555 59.6
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 9.5e-193 677.6 582 58.9
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 2.4e-188 662.9 578 56.6
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.6e-184 650.2 521 61.8
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 4.0e-183 645.6 581 55.1
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 6.6e-178 628.2 592 53.0
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 4.4e-174 615.5 624 50.2
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 3.3e-169 599.4 632 49.2
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 4.3e-169 599.0 373 70.8
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 5.3e-135 485.7 518 50.4
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 1.9e-124 450.7 256 79.3
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.8e-95 354.4 210 78.1
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 4.9e-80 303.1 213 72.3
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 6.8e-66 256.1 196 59.7
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 2.8e-59 234.2 216 56.9
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 8.1e-51 206.1 107 85.0
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 7.4e-44 183.0 132 60.6
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 1.3e-27 129.0 80 75.0
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 2.4e-26 124.8 101 54.5
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 3.4e-25 120.9 65 80.0
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 3.2e-23 114.4 73 69.9
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 9.7e-20 102.8 90 58.9
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 2.1e-14 85.1 43 86.0
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.4e-13 82.4 37 97.3
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 4.4e-12 77.4 39 87.2
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 1.1e-10 72.8 135 34.8


User provided reference genes

Program Settings