Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G139200 Populus trichocarpa HOM05D006213 ORTHO05D008107 8.3e-285 983.0 496 100.0
Sabra02G0108200 Salix brachista HOM05D006213 ORTHO05D008107 2.4e-255 885.2 547 84.6
Sabra02G0108400 Salix brachista HOM05D006213 ORTHO05D008107 9.9e-254 879.8 547 83.9
Manes.05G056250 Manihot esculenta HOM05D006213 ORTHO05D008107 1.5e-230 802.7 496 79.8
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 9.4e-220 766.9 494 75.7
Gohir.A08G139600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 1.3e-216 756.5 493 75.5
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 1.7e-216 756.1 496 75.0
CiPaw.13G025000 Carya illinoinensis HOM05D006213 ORTHO05D008107 3.7e-216 755.0 495 74.9
Thecc.01G397800 Theobroma cacao HOM05D006213 ORTHO05D008107 3.7e-216 755.0 493 75.9
Dinv44047 Davidia involucrata HOM05D006213 ORTHO05D008107 6.3e-216 754.2 495 72.9
Duzib133G0253 Durio zibethinus HOM05D006213 ORTHO05D008107 1.2e-214 750.0 485 75.7
Gohir.D08G160600 Gossypium hirsutum HOM05D006213 ORTHO05D008107 1.2e-214 750.0 493 75.1
RcHm_v2.0_Chr1g0346061 Rosa chinensis HOM05D006213 ORTHO05D008107 4.2e-212 741.5 497 73.4
Ciclev10019843m.g Citrus clementina HOM05D006213 ORTHO05D008107 1.6e-211 739.6 494 72.7
ClCG06G000670 Citrullus lanatus HOM05D006213 ORTHO05D008107 2.6e-209 732.3 494 71.9
CsaV3_6G006460 Cucumis sativus L. HOM05D006213 ORTHO05D008107 4.4e-209 731.5 494 72.1
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 5.7e-209 731.1 495 73.5
Sed0013772 Sechium edule HOM05D006213 ORTHO05D008107 1.4e-207 726.5 494 72.3
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 2.0e-206 722.6 467 76.9
HanXRQChr17g0562541 Helianthus annuus HOM05D006213 ORTHO05D008107 2.2e-205 719.2 494 70.6
Eucgr.E01545 Eucalyptus grandis HOM05D006213 ORTHO05D008107 3.2e-204 715.3 495 71.7
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 5.5e-204 714.5 468 74.4
FAN06G2734 Fragaria x ananassa HOM05D006213 ORTHO05D008107 9.4e-204 713.8 512 68.9
FAN06G3851 Fragaria x ananassa HOM05D006213 ORTHO05D008107 9.4e-204 713.8 512 68.9
FAN06G4345 Fragaria x ananassa HOM05D006213 ORTHO05D008107 9.4e-204 713.8 512 68.9
ECA234G2079 Erigeron canadensis HOM05D006213 ORTHO05D008107 3.6e-203 711.8 489 70.1
Solyc01g089900.4 Solanum lycopersicum HOM05D006213 ORTHO05D008107 1.0e-202 710.3 496 70.4
MSTRG.20674 Avicennia marina HOM05D006213 ORTHO05D008107 1.8e-202 709.5 491 70.9
FvH4_7g09360 Fragaria vesca HOM05D006213 ORTHO05D008107 1.8e-202 709.5 497 70.2
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 1.8e-202 709.5 495 71.7
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 3.0e-202 708.8 496 70.4
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 3.0e-202 708.8 493 70.4
CAN.G1585.8 Capsicum annuum HOM05D006213 ORTHO05D008107 6.7e-202 707.6 496 70.0
FAN03G1287 Fragaria x ananassa HOM05D006213 ORTHO05D008107 2.0e-201 706.1 512 68.9
Actinidia30939 Actinidia chinensis HOM05D006213 ORTHO05D008107 5.7e-201 704.5 475 73.1
Phvul.010G045600 Phaseolus vulgaris HOM05D006213 ORTHO05D008107 5.7e-201 704.5 493 70.0
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 2.2e-200 702.6 491 69.9
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 2.8e-200 702.2 468 73.9
CANSAT25G1963 Cannabis sativa HOM05D006213 ORTHO05D008107 4.8e-200 701.4 495 68.5
MBI04_g13842_MAGBIO Magnolia biondii HOM05D006213 ORTHO05D008107 1.8e-199 699.5 495 68.1
AL1G10080 Arabidopsis lyrata HOM05D006213 ORTHO05D008107 5.3e-199 698.0 490 68.6
CARHR000180 Cardamine hirsuta HOM05D006213 ORTHO05D008107 7.0e-199 697.6 495 68.7
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 7.0e-199 697.6 492 69.5
Medtr8g007345 Medicago truncatula HOM05D006213 ORTHO05D008107 9.1e-199 697.2 491 68.6
Oeu037443.2 Olea europaea HOM05D006213 ORTHO05D008107 4.5e-198 694.9 467 71.5
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 1.3e-197 693.3 491 68.8
Aqoxy3G02673 Aquilegia oxysepala HOM05D006213 ORTHO05D008107 1.7e-197 693.0 495 68.1
Carub.0001s0002 Capsella rubella HOM05D006213 ORTHO05D008107 1.7e-197 693.0 493 68.0
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 1.1e-196 690.3 490 70.2
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 1.5e-196 689.9 493 68.4
Psat4g223120 Pisum sativum HOM05D006213 ORTHO05D008107 3.2e-196 688.7 491 68.6
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 5.5e-196 688.0 493 68.2
C05p00060 Brassica napus HOM05D006213 ORTHO05D008107 7.2e-196 687.6 494 68.2
BolC5t28793H Brassica oleracea HOM05D006213 ORTHO05D008107 7.2e-196 687.6 494 68.2
Sc23g0004890 Simmondsia chinensis HOM05D006213 ORTHO05D008107 2.1e-195 686.0 495 67.3
THA.LOC104814061 Tarenaya hassleriana HOM05D006213 ORTHO05D008107 8.0e-195 684.1 497 68.8
Sp1g00110 Schrenkiella parvula HOM05D006213 ORTHO05D008107 1.4e-194 683.3 490 69.0
MELO3C022474.2 Cucumis melo HOM05D006213 ORTHO05D008107 4.0e-194 681.8 456 72.6
PSO017G1536 Papaver somniferum HOM05D006213 ORTHO05D008107 6.3e-192 674.5 493 66.7
PSO837G0013 Papaver somniferum HOM05D006213 ORTHO05D008107 9.1e-191 670.6 493 66.1
BraA09t42282Z Brassica rapa HOM05D006213 ORTHO05D008107 2.0e-190 669.5 494 67.2
BcaC07g42440 Brassica carinata HOM05D006213 ORTHO05D008107 1.7e-189 666.4 494 66.2
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 2.5e-188 662.5 524 63.2
MD07G1098100 Malus domestica HOM05D006213 ORTHO05D008107 2.1e-187 659.4 438 75.6
Lj3g0010513 Lotus japonicus HOM05D006213 ORTHO05D008107 5.2e-186 654.8 460 69.8
Nn1g00791 Nelumbo nucifera HOM05D006213 ORTHO05D008107 6.8e-186 654.4 495 65.5
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 3.4e-185 652.1 482 64.9
AT1G02145 Arabidopsis thaliana HOM05D006213 ORTHO05D008107 1.1e-183 647.1 453 69.1
AUR62013761 Chenopodium quinoa HOM05D006213 ORTHO05D008107 5.6e-180 634.8 525 61.3
Os04g0544900 Oryza sativa ssp. japonica HOM05D006213 ORTHO05D008107 6.8e-178 627.9 492 61.8
Peaxi162Scf00853g00316 Petunia axillaris HOM05D006213 ORTHO05D008107 1.2e-177 627.1 502 64.3
ATR0665G630 Amborella trichopoda HOM05D006213 ORTHO05D008107 1.5e-177 626.7 484 64.3
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 3.4e-177 625.5 523 62.1
A09p69370 Brassica napus HOM05D006213 ORTHO05D008107 5.7e-177 624.8 504 62.7
SGA_v2.0_scaffold52G19244 Striga asiatica HOM05D006213 ORTHO05D008107 1.1e-175 620.5 467 67.7
TPR.G32127 Trifolium pratense HOM05D006213 ORTHO05D008107 2.4e-175 619.4 517 62.5
vmacro13511 Vaccinium macrocarpon HOM05D006213 ORTHO05D008107 7.0e-175 617.8 608 55.4
Hund17106 Selenicereus undatus HOM05D006213 ORTHO05D008107 2.7e-174 615.9 494 62.8
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 7.8e-174 614.4 475 63.4
BcaB03g13635 Brassica carinata HOM05D006213 ORTHO05D008107 5.6e-172 608.2 493 62.1
Thhalv10007459m.g Eutrema salsugineum HOM05D006213 ORTHO05D008107 1.8e-170 603.2 414 71.5
Zm00001eb075160 Zea mays HOM05D006213 ORTHO05D008107 4.6e-166 588.6 493 58.0
FAN10G1434 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.9e-164 583.2 414 69.1
Sopen01g035740 Solanum pennellii HOM05D006213 ORTHO05D008107 4.7e-163 578.6 411 68.6
BolC8t52928H Brassica oleracea HOM05D006213 ORTHO05D008107 1.1e-162 577.4 513 59.1
Glyma.07G119300 Glycine max HOM05D006213 ORTHO05D008107 8.9e-162 574.3 393 69.5
AUR62023393 Chenopodium quinoa HOM05D006213 ORTHO05D008107 1.2e-161 573.9 517 55.9
Lj2g0022411 Lotus japonicus HOM05D006213 ORTHO05D008107 8.4e-152 541.2 395 67.1
Sabra02G0107000 Salix brachista HOM05D006213 ORTHO05D008107 7.1e-151 538.1 367 76.3
EL10Ac1g00745 Beta vulgaris HOM05D006213 ORTHO05D008107 2.1e-150 536.6 494 56.1
PGSC0003DMG402031172 Solanum tuberosum HOM05D006213 ORTHO05D008107 3.5e-142 509.2 334 74.3
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 7.3e-140 501.5 334 75.4
Mapoly0044s0100 Marchantia polymorpha HOM05D006213 ORTHO05D008107 9.6e-140 501.1 484 53.7
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 6.2e-139 498.4 484 53.9
unitig_8.g3848 Utricularia gibba HOM05D006213 ORTHO05D008107 1.3e-136 490.7 483 55.1
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 3.8e-136 489.2 483 50.9
VMungo0331G0117 Vigna mungo HOM05D006213 ORTHO05D008107 1.9e-135 486.9 691 43.3
Haze_02866 Corylus avellana HOM05D006213 ORTHO05D008107 7.1e-135 485.0 532 54.7
Cc02_g25210 Coffea canephora HOM05D006213 ORTHO05D008107 4.3e-132 475.7 335 70.7
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 1.8e-125 453.8 465 52.9
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 3.0e-125 453.0 446 53.1
Lj9A554T27 Lonicera japonica HOM05D006213 ORTHO05D008107 1.4e-119 434.1 311 69.8
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 3.5e-118 429.5 988 32.6
Rhsim07G0037600 Rhododendron simsii HOM05D006213 ORTHO05D008107 4.1e-98 362.8 437 48.5
SGA_v2.0_scaffold340G49332 Striga asiatica HOM05D006213 ORTHO05D008107 2.0e-97 360.5 498 43.0
Atru.chr5.108 Acer truncatum HOM05D006213 ORTHO05D008107 1.4e-90 337.8 251 67.7
MCO12G031 Micromonas commoda HOM05D006213 ORTHO05D008107 2.3e-77 293.9 546 36.4
SHI13624 Sapria himalayana HOM05D006213 ORTHO05D008107 1.5e-76 291.2 309 54.4
FAN01G1024 Fragaria x ananassa HOM05D006213 ORTHO05D008107 6.3e-75 285.8 201 71.1
FAN06G1264 Fragaria x ananassa HOM05D006213 ORTHO05D008107 4.5e-65 253.1 201 64.2
SEGI_13726 Sequoiadendron giganteum HOM05D006213 ORTHO05D008107 1.6e-62 244.6 183 64.5
PRCOL_00003622 Prasinoderma coloniale HOM05D006213 ORTHO05D008107 2.9e-59 233.8 492 34.6
DCAR_029492 Daucus carota HOM05D006213 ORTHO05D008107 7.3e-55 219.2 161 65.2
arahy.Tifrunner.gnm1.ann1.RXQ5U4 Arachis hypogaea HOM05D006213 ORTHO05D008107 4.6e-49 199.9 160 66.2
Ca_14798_v3 Cicer arietinum L. HOM05D006213 ORTHO05D008107 5.2e-37 159.8 117 69.2
Cc02_g25230 Coffea canephora HOM05D006213 ORTHO05D008107 1.4e-34 151.8 108 59.3
SHI13625 Sapria himalayana HOM05D006213 ORTHO05D008107 1.8e-29 134.8 149 50.3
DCAR_029493 Daucus carota HOM05D006213 ORTHO05D008107 8.7e-24 115.9 67 73.1
Psat4g223040 Pisum sativum HOM05D006213 ORTHO05D008107 1.8e-21 108.2 92 65.2
FAN06G1132 Fragaria x ananassa HOM05D006213 ORTHO05D008107 1.5e-15 88.6 101 46.5
Psat5g245640 Pisum sativum HOM05D000300 ORTHO05D000383 1.9e-15 88.2 66 68.2
Migut.B01510 Erythranthe guttata HOM05D006213 ORTHO05D003423 2.6e-12 77.8 41 82.9
TPR.G39431 Trifolium pratense HOM05D006213 ORTHO05D008107 2.6e-12 77.8 46 73.9
arahy.Tifrunner.gnm1.ann1.PL2W5K Arachis hypogaea HOM05D006213 ORTHO05D008107 2.2e-11 74.7 79 36.7
Cc02_g25220 Coffea canephora HOM05D006213 ORTHO05D008107 2.2e-11 74.7 49 69.4
Atru.chr5.109 Acer truncatum HOM05D006213 ORTHO05D000044 3.8e-11 73.9 64 59.4


User provided reference genes

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