Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.3e-194 682.9 355 100.0
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 2.9e-154 548.9 434 72.1
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 1.8e-111 406.8 359 59.9
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 6.3e-109 398.3 416 53.1
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 6.9e-108 394.8 356 59.0
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 9.0e-108 394.4 413 52.1
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 1.2e-107 394.0 353 58.4
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 5.9e-107 391.7 414 51.7
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 7.7e-107 391.3 356 58.4
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.1e-105 387.5 356 57.3
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 2.5e-105 386.3 357 57.4
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 3.2e-105 386.0 353 57.5
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 1.2e-104 384.0 351 57.8
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 1.0e-103 380.9 353 56.1
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 1.3e-101 374.0 355 55.8
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 3.7e-101 372.5 350 58.0
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 2.0e-99 366.7 359 55.2
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 3.4e-99 365.9 365 52.3
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 5.9e-99 365.2 337 58.8
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 1.7e-98 363.6 361 54.0
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 2.2e-98 363.2 356 54.5
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.0e-98 362.1 356 54.2
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 5.0e-98 362.1 350 56.6
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.5e-97 359.8 355 54.9
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 3.2e-97 359.4 416 49.0
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 7.2e-97 358.2 356 53.9
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 7.9e-96 354.8 360 52.2
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 1.0e-95 354.4 350 55.1
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 1.0e-95 354.4 358 54.5
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.4e-95 354.0 356 53.1
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 2.3e-95 353.2 359 52.6
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 6.7e-95 351.7 359 52.4
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.1e-94 350.9 356 52.8
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 1.1e-94 350.9 348 54.3
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 4.4e-94 349.0 356 52.8
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 9.7e-94 347.8 357 54.1
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 2.8e-93 346.3 357 53.8
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 1.8e-92 343.6 342 51.8
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 1.8e-92 343.6 285 61.4
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 2.4e-92 343.2 356 55.1
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 2.4e-92 343.2 364 54.1
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 7.0e-92 341.7 371 49.9
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 1.5e-91 340.5 287 62.0
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 7.7e-91 338.2 357 51.5
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.3e-90 337.4 348 52.3
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 2.2e-90 336.7 364 51.6
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 8.5e-90 334.7 336 56.2
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 3.2e-89 332.8 359 52.4
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 1.2e-88 330.9 364 49.5
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 2.7e-88 329.7 288 59.4
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 4.7e-88 328.9 363 49.0
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 6.1e-88 328.6 360 51.1
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 8.0e-88 328.2 360 50.6
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 2.3e-87 326.6 288 59.0
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 2.3e-87 326.6 337 53.1
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 3.0e-87 326.2 355 50.7
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 3.9e-87 325.9 331 53.5
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 2.0e-86 323.6 254 63.8
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 2.6e-86 323.2 366 51.4
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.3e-85 320.9 376 46.8
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 1.7e-85 320.5 359 48.7
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 1.7e-85 320.5 362 51.1
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 3.7e-85 319.3 293 59.0
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 4.8e-85 318.9 368 49.2
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 4.8e-85 318.9 368 46.7
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 6.3e-85 318.5 362 49.4
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 6.3e-85 318.5 365 48.5
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 2.4e-84 316.6 286 57.0
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 7.0e-84 315.1 285 59.3
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 2.9e-82 309.7 357 49.0
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 1.5e-81 307.4 306 56.9
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 1.2e-80 304.3 303 55.8
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 1.5e-78 297.4 326 51.2
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 1.4e-76 290.8 402 41.8
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 3.1e-76 289.7 285 54.4
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 1.2e-75 287.7 258 62.0
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 1.1e-73 281.2 207 64.7
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 2.1e-72 276.9 367 45.0
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 6.1e-72 275.4 330 48.8
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 6.1e-72 275.4 368 45.1
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 6.8e-71 271.9 300 51.3
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 2.2e-69 266.9 349 43.0
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 3.6e-64 249.6 412 40.0
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 3.6e-64 249.6 357 40.3
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 5.2e-63 245.7 360 39.7
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 9.8e-62 241.5 267 50.9
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 2.4e-60 236.9 245 53.5
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 4.1e-60 236.1 365 42.2
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 7.8e-59 231.9 255 51.0
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 4.3e-57 226.1 343 42.9
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 2.1e-56 223.8 349 42.7
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 2.6e-54 216.9 559 31.1
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 2.9e-53 213.4 266 48.1
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 2.8e-48 196.8 255 44.7
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 8.1e-48 195.3 164 59.8
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 1.1e-44 184.9 184 50.5
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 6.0e-43 179.1 333 35.1
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 3.4e-38 163.3 310 34.5
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 3.7e-37 159.8 103 72.8
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 6.4e-29 132.5 166 41.0
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 1.7e-26 124.4 233 37.3
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 6.9e-23 112.5 348 26.1
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 5.8e-22 109.4 94 55.3
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 5.4e-20 102.8 88 54.5
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 2.1e-19 100.9 98 50.0
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 2.2e-13 80.9 168 29.8
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 5.5e-12 76.3 46 69.6
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 1.2e-11 75.1 114 39.5
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 2.7e-11 73.9 59 55.9
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 1.1e-09 68.6 84 45.2
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 1.5e-09 68.2 68 51.5
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.9e-09 67.8 351 24.8
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 2.5e-09 67.4 37 75.7
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 7.4e-09 65.9 57 52.6
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 9.6e-09 65.5 165 29.1
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.3e-08 65.1 46 60.9
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 5.3e-07 59.7 132 28.0


User provided reference genes

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