Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 3.7e-185 651.4 322 100.0
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 1.3e-145 520.0 364 73.6
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 2.4e-131 472.6 323 74.0
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 4.9e-129 464.9 325 69.5
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 8.4e-129 464.2 328 70.4
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 2.5e-125 452.6 328 68.0
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 4.3e-125 451.8 323 68.1
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 5.7e-125 451.4 323 67.8
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 5.7e-125 451.4 341 67.2
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 7.4e-125 451.1 325 68.0
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 9.6e-125 450.7 327 67.9
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 3.1e-123 445.7 321 66.0
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 9.0e-123 444.1 328 68.0
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 9.0e-123 444.1 321 66.0
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 3.4e-122 442.2 321 65.7
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 3.2e-120 435.6 324 69.4
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 7.2e-120 434.5 328 65.9
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.1e-119 433.0 324 66.0
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.1e-119 433.0 324 66.0
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.3e-118 430.3 331 65.3
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 6.3e-116 421.4 323 65.0
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 8.2e-116 421.0 326 64.7
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 9.0e-115 417.5 329 62.0
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 2.6e-114 416.0 323 65.6
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 1.3e-113 413.7 322 63.4
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 5.0e-113 411.8 327 63.0
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 8.5e-113 411.0 328 62.2
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 4.2e-112 408.7 328 63.4
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 1.2e-111 407.1 319 63.0
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.6e-111 406.8 291 69.4
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 2.3e-110 402.9 322 65.5
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 3.9e-110 402.1 327 60.9
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 3.9e-110 402.1 328 61.3
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 8.8e-110 401.0 323 61.9
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.1e-109 400.6 323 60.7
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 1.1e-109 400.6 328 62.2
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.0e-109 399.8 328 60.4
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 2.5e-109 399.4 323 60.7
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 3.3e-109 399.1 320 61.2
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 1.3e-108 397.1 328 61.3
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.7e-108 396.7 324 61.1
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 3.7e-108 395.6 323 61.0
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.1e-107 394.0 327 61.2
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 4.5e-106 388.7 328 60.7
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 1.0e-105 387.5 329 60.5
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.3e-105 387.1 327 60.6
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.3e-105 387.1 318 61.9
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.9e-105 386.0 324 64.8
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 5.0e-105 385.2 325 61.5
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 8.5e-105 384.4 326 60.7
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 1.1e-104 384.0 322 63.7
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 3.2e-104 382.5 329 59.0
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 5.5e-104 381.7 323 59.8
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 1.6e-103 380.2 328 59.5
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.1e-103 379.8 343 56.0
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 2.1e-103 379.8 324 58.3
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.1e-103 379.8 329 62.9
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.1e-103 379.8 329 62.9
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 2.1e-103 379.8 328 60.1
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 6.1e-103 378.3 328 58.5
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 3.9e-102 375.6 290 65.2
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 5.1e-102 375.2 328 58.2
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.3e-100 370.5 300 62.0
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 2.8e-100 369.4 283 64.0
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 6.3e-100 368.2 329 56.5
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 8.2e-100 367.9 323 57.3
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 2.4e-99 366.3 330 56.1
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 3.1e-99 365.9 328 56.1
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 9.1e-99 364.4 296 62.2
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 1.6e-98 363.6 333 56.5
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 1.3e-97 360.5 327 58.1
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 6.5e-97 358.2 330 59.7
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 1.1e-96 357.5 321 56.7
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 3.2e-96 355.9 320 55.3
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 5.5e-96 355.1 328 55.2
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 9.4e-96 354.4 329 55.3
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 3.6e-95 352.4 267 67.0
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 2.3e-94 349.7 312 56.7
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 5.2e-94 348.6 320 56.9
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 2.0e-93 346.7 321 55.5
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.0e-93 346.7 322 55.0
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 3.3e-93 345.9 321 54.2
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 5.7e-93 345.1 325 57.2
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 9.7e-93 344.4 323 55.1
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 9.7e-93 344.4 323 55.1
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.7e-92 343.6 325 56.3
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 2.7e-90 336.3 325 53.8
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 4.5e-90 335.5 323 54.8
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 1.2e-87 327.4 326 57.1
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 6.1e-87 325.1 331 51.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.3e-81 307.4 320 52.2
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 8.5e-81 304.7 328 48.8
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 1.0e-78 297.7 329 51.1
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 3.5e-74 282.7 325 47.1
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 5.9e-74 282.0 327 45.3
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 5.0e-73 278.9 259 54.4
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 7.3e-72 275.0 259 57.1
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 2.1e-71 273.5 339 44.8
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 2.0e-69 266.9 321 46.4
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 3.5e-66 256.1 347 42.4
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.2e-61 241.1 328 42.1
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 4.6e-58 229.2 217 58.1
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.3e-57 226.9 382 35.6
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 4.3e-56 222.6 178 63.5
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.6e-55 220.7 381 36.7
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.6e-47 193.0 148 64.9
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 8.4e-44 181.8 133 66.2
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 4.3e-40 169.5 117 67.5
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.6e-39 167.5 133 62.4
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.9e-36 156.0 133 56.4
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.9e-35 154.1 279 36.9
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 4.2e-35 152.9 120 65.8
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 8.7e-33 145.2 121 61.2
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 2.8e-31 140.2 144 56.2
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 1.2e-29 134.8 325 27.4
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.2e-26 124.8 105 58.1
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 3.0e-25 120.2 137 49.6
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 4.5e-21 106.3 86 60.5
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 2.2e-20 104.0 149 45.0
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 2.1e-18 97.4 102 52.9
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 3.7e-15 86.7 63 63.5
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 1.1e-14 85.1 321 25.2
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.3e-14 82.8 61 65.6
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 4.2e-11 73.2 69 50.7
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 1.2e-10 71.6 53 66.0


User provided reference genes

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