Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.1e-121 439.9 209 100.0
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 3.6e-96 355.1 210 82.9
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 4.4e-94 348.2 210 82.4
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 6.8e-79 297.7 212 67.5
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 1.9e-73 279.6 210 66.2
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 1.0e-71 273.9 208 65.4
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 1.2e-70 270.4 214 62.1
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 2.6e-70 269.2 208 66.3
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 2.6e-70 269.2 208 66.3
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 4.4e-70 268.5 208 64.9
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.3e-69 266.9 208 63.9
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 9.2e-68 260.8 209 63.6
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 9.2e-68 260.8 209 63.6
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 1.0e-66 257.3 213 62.9
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.3e-66 256.9 212 61.8
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 2.5e-65 252.7 211 62.1
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.1e-63 247.3 215 56.3
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.4e-63 246.9 215 56.3
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.0e-63 245.4 215 56.3
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 9.8e-62 240.7 212 62.3
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 2.9e-61 239.2 201 60.7
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 2.4e-60 236.1 221 60.2
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.1e-60 235.3 212 60.8
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 5.4e-60 235.0 203 62.1
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 7.0e-60 234.6 212 55.2
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 7.0e-60 234.6 204 60.3
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 9.2e-60 234.2 209 57.9
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 9.2e-60 234.2 212 55.2
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 1.2e-59 233.8 203 59.6
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.6e-59 233.4 218 57.3
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.0e-58 230.7 209 56.9
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 1.3e-58 230.3 210 55.7
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 3.0e-58 229.2 226 53.5
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.9e-58 228.8 212 53.8
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 1.5e-57 226.9 210 55.2
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 2.5e-57 226.1 204 59.8
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 5.6e-57 224.9 211 55.9
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 1.6e-56 223.4 212 55.7
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.7e-56 221.9 212 59.4
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 6.2e-56 221.5 225 54.7
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 4.0e-55 218.8 198 58.6
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 8.9e-55 217.6 215 54.4
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.6e-54 216.1 212 58.5
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 4.4e-54 215.3 210 54.3
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 7.5e-54 214.5 211 52.6
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.3e-53 213.8 210 54.8
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 1.7e-53 213.4 214 57.0
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 2.2e-53 213.0 159 64.8
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 6.4e-53 211.5 205 54.6
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 6.4e-53 211.5 200 54.0
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 8.3e-53 211.1 208 51.9
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.9e-52 209.9 207 53.1
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 4.1e-52 208.8 205 54.6
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 2.1e-51 206.5 203 51.2
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 2.1e-51 206.5 205 52.2
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 3.5e-51 205.7 211 53.6
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 6.0e-51 204.9 203 52.2
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 1.3e-50 203.8 206 51.0
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 1.3e-50 203.8 211 55.0
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.3e-50 203.8 213 50.2
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 3.9e-50 202.2 207 54.1
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 5.1e-50 201.8 206 51.9
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.9e-49 199.9 208 53.4
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 2.5e-49 199.5 212 53.8
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 2.1e-48 196.4 198 51.0
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.1e-47 194.1 205 50.7
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.4e-47 193.7 203 51.2
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 1.8e-47 193.4 201 53.7
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 2.9e-45 186.0 238 47.1
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 6.4e-45 184.9 213 49.8
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 2.4e-44 183.0 208 45.2
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 2.4e-44 183.0 200 47.5
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 2.4e-44 183.0 216 48.6
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 9.2e-44 181.0 210 47.1
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 1.6e-43 180.3 204 50.0
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.0e-42 177.6 193 50.8
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 7.3e-41 171.4 232 44.4
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 1.8e-39 166.8 218 43.1
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 2.4e-39 166.4 208 45.7
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.4e-38 162.5 223 43.0
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 7.6e-38 161.4 171 52.0
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 8.4e-37 157.9 214 44.4
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 4.2e-36 155.6 208 46.2
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 5.4e-36 155.2 204 44.1
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 7.1e-36 154.8 217 43.8
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 9.3e-36 154.5 222 41.0
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 2.1e-35 153.3 206 41.7
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 7.8e-35 151.4 139 53.2
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.0e-34 151.0 211 45.5
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 1.3e-34 150.6 196 47.4
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 8.7e-34 147.9 171 50.3
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 8.7e-34 147.9 214 42.5
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 8.7e-34 147.9 212 42.0
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 1.9e-33 146.7 174 46.0
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 2.8e-32 142.9 199 43.2
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 3.1e-31 139.4 197 43.7
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 9.0e-31 137.9 199 43.7
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 9.0e-31 137.9 195 43.1
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 9.0e-31 137.9 195 43.1
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 1.2e-30 137.5 199 42.2
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 2.0e-30 136.7 199 42.2
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 3.4e-30 136.0 187 45.5
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 7.6e-30 134.8 200 43.5
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 9.9e-30 134.4 195 42.6
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.1e-28 131.0 199 41.2
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 7.9e-27 124.8 102 56.9
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 5.1e-26 122.1 226 39.8
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 8.7e-26 121.3 225 38.7
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.9e-25 120.2 214 40.2
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 3.7e-24 115.9 214 40.2
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 3.7e-24 115.9 214 40.2
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.4e-23 113.2 160 41.9
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.2e-22 110.9 196 37.2
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 3.4e-22 109.4 218 36.2
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 1.6e-19 100.5 147 40.8
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 4.6e-19 99.0 313 29.4
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 3.3e-17 92.8 115 47.0
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 1.3e-13 80.9 237 30.0
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.1e-12 77.8 163 31.9
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 7.1e-12 75.1 163 32.5
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 1.2e-11 74.3 193 34.2
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 1.8e-10 70.5 153 34.6
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.8e-07 60.5 94 41.5
Os09g0460100 Oryza sativa ssp. japonica HOM05D006157 ORTHO05D007826 5.9e-06 55.5 215 26.0


User provided reference genes

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