Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 7.7e-266 919.8 440 100.0
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 2.5e-248 861.7 440 93.2
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 8.4e-188 660.6 441 71.7
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 3.9e-161 572.0 450 62.7
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 1.1e-155 553.9 453 61.4
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.4e-155 553.5 458 61.1
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 9.4e-155 550.8 453 60.5
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 1.0e-153 547.4 448 61.4
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 5.1e-153 545.0 461 58.6
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 6.7e-153 544.7 464 59.7
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-152 543.9 450 61.6
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.5e-152 543.5 453 59.8
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.5e-152 542.7 450 61.3
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.1e-150 537.3 449 60.6
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.8e-150 536.6 450 58.0
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.4e-150 536.2 462 59.7
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 5.0e-148 528.5 446 59.0
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 8.5e-148 527.7 450 57.1
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 4.7e-146 521.9 450 56.7
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 4.7e-146 521.9 456 58.1
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 1.0e-145 520.8 449 58.6
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 3.9e-145 518.8 471 57.7
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 6.7e-145 518.1 447 56.8
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 5.7e-144 515.0 446 58.1
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 1.7e-143 513.5 462 55.6
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 4.1e-142 508.8 448 57.4
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 2.0e-141 506.5 447 57.3
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.0e-140 504.2 446 57.2
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 5.0e-140 501.9 465 54.6
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 3.2e-139 499.2 459 54.9
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.1e-138 496.5 462 57.8
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 8.0e-138 494.6 460 55.7
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.4e-137 493.8 474 53.2
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.0e-137 492.7 460 55.4
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 5.2e-137 491.9 442 57.9
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 5.2e-137 491.9 442 56.8
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 5.2e-137 491.9 465 55.7
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.1e-136 490.7 457 56.0
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 2.0e-136 490.0 443 56.2
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 2.6e-136 489.6 446 56.3
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 7.4e-136 488.0 445 56.6
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.7e-135 485.7 445 56.4
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 6.3e-135 485.0 453 55.2
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 5.3e-134 481.9 451 54.3
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 1.6e-133 480.3 454 54.4
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 1.6e-133 480.3 452 54.2
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 2.0e-133 479.9 448 58.3
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 2.6e-133 479.6 438 55.3
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.5e-133 479.2 444 55.9
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 7.7e-133 478.0 464 53.7
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 3.8e-132 475.7 448 57.1
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 5.0e-132 475.3 447 55.3
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 5.0e-132 475.3 453 54.3
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 2.5e-131 473.0 448 57.1
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 5.2e-129 465.3 451 54.5
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.0e-128 463.4 451 52.1
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 6.3e-127 458.4 446 54.7
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 1.1e-126 457.6 439 51.9
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 9.1e-126 454.5 443 53.0
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 1.6e-125 453.8 442 53.2
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 2.0e-125 453.4 444 52.5
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 7.7e-125 451.4 450 53.6
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 1.3e-124 450.7 454 51.8
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 3.8e-124 449.1 450 51.8
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 3.2e-123 446.0 448 51.6
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 2.6e-120 436.4 439 52.2
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 2.2e-119 433.3 448 50.9
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 2.2e-119 433.3 449 51.2
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 3.7e-119 432.6 445 51.5
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 6.3e-119 431.8 454 50.4
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 8.3e-119 431.4 434 51.2
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 1.5e-115 420.6 436 51.4
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.8e-114 416.4 429 50.8
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 4.0e-113 412.5 449 49.2
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 2.2e-111 406.8 432 50.5
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 2.2e-111 406.8 432 50.5
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 2.2e-111 406.8 434 50.7
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 1.6e-109 400.6 437 49.4
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 7.8e-109 398.3 432 49.8
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 6.6e-108 395.2 432 50.2
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 8.6e-108 394.8 430 50.2
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 1.5e-107 394.0 432 50.5
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.3e-107 392.5 431 47.6
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.6e-106 390.6 403 52.4
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 2.1e-106 390.2 444 47.1
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 3.6e-106 389.4 430 49.5
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 4.7e-106 389.0 460 46.5
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.7e-106 389.0 428 49.1
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 6.1e-106 388.7 429 49.0
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.0e-105 387.9 430 49.1
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 4.4e-104 382.5 471 45.6
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 1.3e-103 380.9 438 47.0
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.4e-102 377.5 491 45.4
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 3.9e-100 369.4 431 46.9
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 5.8e-96 355.5 312 57.7
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 2.4e-94 350.1 296 58.8
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 1.7e-92 344.0 434 43.1
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.1e-89 334.7 441 42.2
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 5.1e-84 315.8 389 44.7
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 1.4e-78 297.7 304 52.6
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.7e-69 266.9 277 50.5
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 6.2e-66 255.8 234 55.1
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 3.1e-65 253.4 485 33.0
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.3e-63 248.1 267 50.2
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.9e-55 219.5 330 40.9
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 9.3e-54 215.3 368 36.7
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.6e-50 204.5 517 30.0
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 3.8e-47 193.4 225 50.2
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 6.5e-39 166.0 149 53.7
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 7.2e-38 162.5 355 31.3
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 4.8e-34 149.8 550 24.4
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.1e-33 146.7 192 43.2
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.0e-27 127.9 101 57.4
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 7.4e-27 125.9 129 47.3
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 2.8e-26 124.0 90 60.0
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 9.1e-25 119.0 116 53.4
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.2e-22 109.4 90 54.4
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 3.6e-21 107.1 101 49.5
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 6.7e-20 102.8 89 58.4
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 2.6e-19 100.9 226 35.0
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 3.1e-17 94.0 84 57.1
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 9.1e-17 92.4 90 51.1
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 9.1e-17 92.4 74 55.4
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.6e-16 91.7 157 35.7


User provided reference genes

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