Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 3.7e-143 511.5 261 100.0
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 4.3e-131 471.5 250 95.2
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 6.0e-109 397.9 254 79.5
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 3.2e-102 375.6 250 77.2
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 7.1e-102 374.4 250 74.8
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 2.3e-100 369.4 250 72.8
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 3.3e-99 365.5 250 73.2
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 1.6e-98 363.2 250 73.2
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 1.5e-96 356.7 250 72.0
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 2.0e-96 356.3 250 72.4
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 2.0e-96 356.3 250 71.2
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 2.6e-96 355.9 250 72.8
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 3.4e-96 355.5 251 71.3
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 5.8e-96 354.8 250 70.8
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 5.8e-96 354.8 250 70.8
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 5.8e-96 354.8 251 70.5
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 1.7e-95 353.2 247 71.7
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 2.9e-95 352.4 256 70.7
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 1.9e-94 349.7 250 71.2
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.9e-94 349.7 250 72.0
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 3.2e-94 349.0 250 71.2
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 4.2e-94 348.6 250 71.2
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.2e-93 347.1 250 70.4
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 2.7e-93 345.9 251 70.5
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 3.5e-93 345.5 250 71.2
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 6.0e-93 344.7 250 70.4
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.0e-92 344.0 250 70.4
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 5.1e-92 341.7 250 72.0
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 1.9e-91 339.7 251 68.9
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 1.9e-91 339.7 250 69.6
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 5.7e-91 338.2 249 67.9
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 1.3e-90 337.0 250 68.4
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 1.6e-90 336.7 251 68.1
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 6.3e-90 334.7 252 67.1
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 8.2e-90 334.3 249 67.5
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.1e-89 334.0 250 69.6
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.4e-89 332.8 257 67.3
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 4.1e-89 332.0 259 63.7
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 5.3e-89 331.6 250 65.2
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 6.9e-89 331.3 250 69.2
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 1.2e-88 330.5 250 68.4
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 1.5e-88 330.1 253 66.0
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 1.5e-88 330.1 250 66.0
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 3.4e-88 328.9 250 66.8
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 4.5e-88 328.6 252 65.5
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 7.6e-88 327.8 250 66.0
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 1.3e-87 327.0 250 65.6
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 1.3e-87 327.0 250 67.6
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 2.9e-87 325.9 231 71.0
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 3.8e-87 325.5 252 64.7
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 1.1e-86 323.9 250 64.4
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.4e-86 323.6 255 63.5
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 1.9e-86 323.2 250 62.0
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 2.5e-86 322.8 251 64.9
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 3.2e-86 322.4 250 64.8
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 3.2e-86 322.4 250 64.8
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 7.2e-86 321.2 250 62.8
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 9.3e-86 320.9 257 66.5
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 1.2e-85 320.5 256 64.5
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 2.1e-85 319.7 250 64.0
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 4.6e-85 318.5 250 64.8
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 6.1e-85 318.2 250 64.8
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 7.9e-85 317.8 249 67.1
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 1.0e-84 317.4 254 64.6
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 1.0e-84 317.4 250 63.6
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 1.3e-84 317.0 252 64.7
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 2.3e-84 316.2 248 64.5
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 3.0e-84 315.8 251 64.5
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 5.1e-84 315.1 257 63.4
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 6.7e-84 314.7 250 65.6
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 6.7e-84 314.7 250 62.4
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 1.5e-83 313.5 250 64.8
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 1.5e-83 313.5 223 71.7
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 2.5e-83 312.8 251 64.1
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 9.7e-83 310.8 251 64.1
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.6e-82 310.1 250 64.4
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 2.8e-82 309.3 250 62.8
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 3.7e-82 308.9 250 62.0
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 1.8e-81 306.6 250 62.8
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 1.8e-81 306.6 250 62.8
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 4.1e-81 305.4 250 62.0
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 5.3e-81 305.1 250 62.8
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 5.3e-81 305.1 250 62.4
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 4.5e-80 302.0 251 62.5
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 2.9e-79 299.3 250 64.8
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 1.4e-78 297.0 251 60.2
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 1.4e-78 297.0 251 60.2
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 4.2e-78 295.4 252 58.7
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 3.6e-77 292.4 250 62.8
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 6.7e-76 288.1 220 66.8
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 1.1e-75 287.3 227 63.0
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 3.3e-75 285.8 282 55.0
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 5.1e-68 261.9 252 56.3
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 6.3e-66 255.0 235 59.1
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 6.3e-66 255.0 252 48.8
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 6.3e-66 255.0 252 48.8
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 5.3e-65 251.9 190 68.9
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 4.2e-62 242.3 146 81.5
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 2.6e-59 233.0 249 49.0
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 4.4e-59 232.3 250 53.2
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 9.7e-59 231.1 249 49.0
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 6.3e-58 228.4 251 53.4
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 2.5e-54 216.5 224 54.5
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 8.0e-53 211.5 252 48.4
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 2.6e-51 206.5 251 46.6
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 1.3e-50 204.1 253 43.9
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 6.3e-50 201.8 260 43.1
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 9.1e-49 198.0 159 61.6
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 2.7e-48 196.4 254 41.7
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 5.0e-47 192.2 146 66.4
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 7.5e-43 178.3 135 64.4
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 1.8e-41 173.7 136 63.2
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 4.1e-41 172.6 251 42.2
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 3.5e-40 169.5 111 73.9
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 9.8e-35 151.4 248 38.3
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 6.4e-34 148.7 133 59.4
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 7.8e-32 141.7 251 41.0
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 6.2e-29 132.1 139 48.9
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 2.3e-28 130.2 168 51.2
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 1.2e-27 127.9 109 63.3
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 1.6e-24 117.5 260 30.4
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 4.7e-13 79.3 110 45.5
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.2e-11 74.7 117 39.3
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 1.7e-10 70.9 93 35.5
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 1.1e-09 68.2 90 51.1
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 1.1e-09 68.2 90 51.1
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 2.1e-08 63.9 150 28.7


User provided reference genes

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