Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 9.2e-79 297.0 166 100.0
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 1.5e-57 226.5 166 83.7
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 3.8e-48 195.3 165 75.2
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 1.6e-30 136.7 163 62.6
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 1.6e-27 126.7 164 56.7
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 2.4e-26 122.9 166 58.4
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 2.9e-24 115.9 157 53.5
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 5.0e-24 115.2 163 55.8
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 5.0e-24 115.2 163 55.8
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 5.0e-24 115.2 159 56.0
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 1.4e-23 113.6 170 54.7
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 2.5e-23 112.8 169 53.3
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.0e-21 105.9 153 53.6
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.9e-21 105.5 153 53.6
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 8.7e-21 104.4 154 50.6
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.9e-20 103.2 154 50.0
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 1.6e-19 100.1 172 45.9
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 1.4e-18 97.1 173 50.3
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 4.1e-18 95.5 163 46.0
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 5.3e-18 95.1 156 53.8
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 5.3e-18 95.1 159 48.4
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 6.9e-18 94.7 121 63.6
Ciclev10002675m.g Citrus clementina HOM05D008046 ORTHO05D004477 1.5e-17 93.6 169 51.5
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 1.5e-17 93.6 160 50.6
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.0e-16 90.9 148 43.2
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 2.2e-16 89.7 177 51.4
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 2.2e-16 89.7 179 41.3
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 6.5e-16 88.2 153 41.8
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 2.5e-15 86.3 150 49.3
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 4.2e-15 85.5 158 51.3
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 4.2e-15 85.5 149 51.7
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 7.2e-15 84.7 156 50.0
CSS0043643 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 9.4e-15 84.3 146 47.3
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 3.6e-14 82.4 155 37.4
Gorai.005G094600 Gossypium raimondii HOM05D008046 ORTHO05D004477 4.6e-14 82.0 139 52.5
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 6.1e-14 81.6 152 44.1
Gohir.D05G267950 Gossypium hirsutum HOM05D008046 ORTHO05D004477 7.9e-14 81.3 162 40.7
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.0e-13 80.9 161 46.6
Gohir.A02G076800 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.4e-13 80.5 139 53.2
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 1.4e-13 80.5 160 45.6
Gorai.009G280100 Gossypium raimondii HOM05D008046 ORTHO05D004477 2.3e-13 79.7 163 39.9
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 3.0e-13 79.3 178 43.8
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 3.9e-13 79.0 156 45.5
Gohir.D02G084000 Gossypium hirsutum HOM05D008046 ORTHO05D004477 6.7e-13 78.2 158 51.9
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 8.8e-13 77.8 166 42.2
Gorai.002G141100 Gossypium raimondii HOM05D008046 ORTHO05D004477 2.0e-12 76.6 151 50.3
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 2.0e-12 76.6 153 46.4
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 4.3e-12 75.5 155 51.0
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 5.7e-12 75.1 164 46.3
CSS0015684 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 7.4e-12 74.7 148 45.3
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 7.4e-12 74.7 164 45.7
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 7.4e-12 74.7 164 45.7
Lalb_Chr23g0270371 Lupinus albus HOM05D008046 ORTHO05D004477 7.4e-12 74.7 167 44.3
FAN18G3731 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.7e-11 73.6 164 45.7
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 1.7e-11 73.6 172 44.2
Lj1g0004298 Lotus japonicus HOM05D008046 ORTHO05D004477 2.2e-11 73.2 158 44.3
FvH4_5g36590 Fragaria vesca HOM05D018381 ORTHO05D004477 2.8e-11 72.8 164 45.7
Solyc04g074680.1 Solanum lycopersicum HOM05D010872 ORTHO05D004477 4.8e-11 72.0 149 49.0
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 3.1e-10 69.3 159 45.9
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 4.1e-10 68.9 165 37.6
Medtr3g099490 Medicago truncatula HOM05D008046 ORTHO05D004477 6.9e-10 68.2 156 44.2
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 9.1e-10 67.8 156 45.5
Glyma.14G177400 Glycine max HOM05D008046 ORTHO05D004477 9.1e-10 67.8 156 45.5
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 4.5e-09 65.5 172 40.7
Lalb_Chr08g0242201 Lupinus albus HOM05D008046 ORTHO05D004477 1.0e-08 64.3 175 41.7
RcHm_v2.0_Chr7g0242321 Rosa chinensis HOM05D018381 ORTHO05D004477 1.0e-08 64.3 171 43.3
VMungo0647G1155 Vigna mungo HOM05D008046 ORTHO05D004477 1.0e-08 64.3 154 44.2
Medtr5g064640 Medicago truncatula HOM05D008046 ORTHO05D004477 1.3e-08 63.9 155 39.4
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.7e-08 63.5 154 34.4
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.7e-08 63.5 140 37.1
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 2.2e-08 63.2 148 45.9
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 2.2e-08 63.2 154 35.1
CDE05G1898 Ceratophyllum demersum HOM05D000157 ORTHO05D000691 2.9e-08 62.8 132 37.9
Gohir.A06G033600 Gossypium hirsutum HOM05D037684 ORTHO05D004477 2.9e-08 62.8 113 50.4
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 2.9e-08 62.8 133 37.6
ClCG11G014290 Citrullus lanatus HOM05D026294 ORTHO05D004477 3.8e-08 62.4 149 42.3
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 3.8e-08 62.4 153 35.3
Phvul.008G176900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 3.8e-08 62.4 46 67.4
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 5.0e-08 62.0 155 34.2
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 6.5e-08 61.6 153 34.0
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 6.5e-08 61.6 154 34.4
Migut.H02240 Erythranthe guttata HOM05D008046 ORTHO05D004477 1.1e-07 60.8 167 37.1
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 1.1e-07 60.8 171 31.6
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.4e-07 60.5 138 42.0
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 1.9e-07 60.1 160 38.1
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 1.9e-07 60.1 154 35.1
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 1.9e-07 60.1 128 39.8
Migut.K01109 Erythranthe guttata HOM05D008046 ORTHO05D004477 1.9e-07 60.1 173 33.5
Sopen04g029650 Solanum pennellii HOM05D010872 ORTHO05D013672 1.9e-07 60.1 151 45.0
Psat0s5249g0040 Pisum sativum HOM05D008046 ORTHO05D004477 2.5e-07 59.7 124 50.0
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 2.5e-07 59.7 150 35.3
THA.LOC104816630 Tarenaya hassleriana HOM05D010872 ORTHO05D013672 3.2e-07 59.3 147 43.5
SGA_v2.0_scaffold115G32090 Striga asiatica HOM05D010872 ORTHO05D004477 4.2e-07 58.9 127 35.4
Cpa.g.sc36.179 Carica papaya HOM05D008046 ORTHO05D004477 5.5e-07 58.5 143 49.7
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 7.2e-07 58.2 150 32.7
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 7.2e-07 58.2 135 45.2
Gohir.D06G034500 Gossypium hirsutum HOM05D037684 ORTHO05D004477 9.4e-07 57.8 113 54.0
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 1.6e-06 57.0 144 34.0
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 1.6e-06 57.0 154 42.9
Gorai.010G038000 Gossypium raimondii HOM05D037684 ORTHO05D004477 1.6e-06 57.0 113 54.0
CANSAT25G2152 Cannabis sativa HOM05D008046 ORTHO05D004477 2.7e-06 56.2 169 39.6
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 2.7e-06 56.2 53 54.7
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 4.7e-06 55.5 152 29.6
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 4.7e-06 55.5 43 62.8
THA.LOC104809723 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 7.9e-06 54.7 38 68.4


User provided reference genes

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