Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 2.3e-54 215.3 108 100.0
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 3.7e-36 154.8 109 69.7
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 8.5e-33 143.7 110 66.4
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 1.4e-32 142.9 110 65.5
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 9.3e-32 140.2 110 58.2
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 1.6e-31 139.4 110 58.2
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 3.6e-31 138.3 110 58.2
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 6.1e-31 137.5 109 66.1
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 1.4e-30 136.3 110 65.5
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 3.9e-30 134.8 110 60.9
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 1.1e-29 133.3 111 64.0
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 2.5e-29 132.1 108 63.0
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 2.5e-29 132.1 111 61.3
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 2.5e-29 132.1 111 56.8
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 3.3e-29 131.7 109 62.4
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 4.3e-29 131.3 111 59.5
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 9.7e-29 130.2 111 55.0
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 1.3e-28 129.8 110 54.5
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 2.2e-28 129.0 105 60.0
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 2.2e-28 129.0 112 58.9
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 2.8e-28 128.6 110 60.0
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 4.8e-28 127.9 110 53.6
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 8.2e-28 127.1 110 62.7
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 1.1e-27 126.7 109 56.0
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 1.1e-27 126.7 111 59.5
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 1.8e-27 125.9 110 60.0
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 2.4e-27 125.6 109 56.0
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 1.5e-26 122.9 111 53.2
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 1.5e-26 122.9 107 54.2
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 1.5e-26 122.9 111 55.0
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 2.0e-26 122.5 110 52.7
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 3.4e-26 121.7 110 54.5
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 3.4e-26 121.7 105 56.2
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 4.5e-26 121.3 112 58.9
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 4.5e-26 121.3 112 58.9
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 7.7e-26 120.6 108 55.6
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 1.0e-25 120.2 110 53.6
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 1.0e-25 120.2 111 56.8
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 1.3e-25 119.8 111 51.4
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 1.3e-25 119.8 111 51.4
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 1.3e-25 119.8 111 55.0
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 1.7e-25 119.4 111 51.4
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 1.7e-25 119.4 110 57.3
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 1.7e-25 119.4 108 55.6
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 1.7e-25 119.4 108 55.6
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 2.2e-25 119.0 110 51.8
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 2.2e-25 119.0 112 58.0
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 2.9e-25 118.6 110 52.7
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 5.0e-25 117.9 108 54.6
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 1.1e-24 116.7 111 52.3
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 1.4e-24 116.3 110 57.3
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 1.9e-24 115.9 112 51.8
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 2.5e-24 115.5 117 51.3
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 3.2e-24 115.2 112 51.8
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 4.2e-24 114.8 108 52.8
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 4.2e-24 114.8 111 54.1
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 4.2e-24 114.8 108 54.6
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 7.2e-24 114.0 105 50.5
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 7.2e-24 114.0 111 54.1
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 7.2e-24 114.0 106 50.9
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 1.2e-23 113.2 113 46.0
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 2.1e-23 112.5 109 52.3
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 3.6e-23 111.7 107 54.2
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 6.1e-23 110.9 107 54.2
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 6.1e-23 110.9 111 52.3
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 2.3e-22 109.0 101 51.5
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 3.0e-22 108.6 110 45.5
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 5.1e-22 107.8 106 50.9
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 2.0e-21 105.9 110 47.3
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 1.3e-20 103.2 106 47.2
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 1.7e-20 102.8 106 47.2
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 1.7e-20 102.8 105 45.7
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 2.2e-20 102.4 113 47.8
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 6.3e-20 100.9 103 55.3
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 8.2e-20 100.5 114 46.5
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 8.2e-20 100.5 112 47.3
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 1.1e-19 100.1 109 45.0
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 3.1e-19 98.6 106 51.9
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 9.1e-19 97.1 110 46.4
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 1.2e-18 96.7 70 60.0
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 2.6e-18 95.5 107 47.7
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 4.5e-18 94.7 113 42.5
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 5.9e-18 94.4 108 43.5
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 8.5e-17 90.5 113 40.7
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 3.2e-16 88.6 78 56.4
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 3.2e-16 88.6 106 40.6
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 1.2e-15 86.7 97 43.3
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 1.6e-15 86.3 91 53.8
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 1.6e-15 86.3 93 44.1
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 3.6e-15 85.1 68 60.3
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 1.8e-14 82.8 100 40.0
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 3.7e-12 75.1 68 50.0
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 4.8e-12 74.7 75 49.3
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 6.3e-12 74.3 76 43.4
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 7.0e-11 70.9 73 49.3
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 1.6e-07 59.7 111 32.4


User provided reference genes

Program Settings