Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 6.9e-237 823.5 404 100.0
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 1.2e-172 610.1 381 81.9
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 2.6e-143 512.7 392 65.8
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 2.4e-128 463.0 385 59.7
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 4.9e-126 455.3 394 58.1
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 1.4e-125 453.8 400 56.2
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 3.2e-125 452.6 401 56.4
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 2.1e-124 449.9 400 57.2
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 1.0e-123 447.6 402 60.0
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 1.0e-123 447.6 398 57.0
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 4.3e-122 442.2 393 57.8
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 4.5e-119 432.2 389 57.6
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 9.9e-119 431.0 390 56.7
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 3.8e-118 429.1 396 57.6
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 1.1e-117 427.6 391 55.2
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 2.1e-116 423.3 386 56.2
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 1.3e-115 420.6 395 55.7
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 1.8e-115 420.2 360 58.3
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 6.7e-115 418.3 404 54.0
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 1.1e-114 417.5 354 59.9
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 6.2e-113 411.8 369 56.4
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 2.4e-112 409.8 376 54.8
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 3.1e-112 409.5 382 54.5
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 4.5e-111 405.6 390 54.1
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 1.3e-110 404.1 396 54.5
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 1.3e-110 404.1 400 54.2
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.7e-110 403.7 396 54.3
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 4.9e-110 402.1 389 52.2
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 1.1e-109 401.0 386 52.3
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.4e-109 400.6 396 54.5
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 5.5e-109 398.7 399 53.1
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.6e-108 397.1 397 54.2
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 2.8e-105 386.3 398 52.3
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 1.8e-104 383.6 445 47.2
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 7.6e-103 378.3 307 61.2
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 7.6e-103 378.3 358 53.4
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.9e-102 376.3 342 57.0
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 3.2e-101 372.9 384 53.6
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 3.9e-99 365.9 358 55.6
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 1.5e-95 354.0 388 49.5
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 2.2e-94 350.1 403 46.2
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 6.5e-94 348.6 383 50.7
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 1.1e-93 347.8 288 59.0
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 9.3e-93 344.7 384 49.2
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 9.3e-93 344.7 355 52.4
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 1.6e-92 344.0 309 56.6
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 1.5e-90 337.4 308 57.5
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 3.0e-83 313.2 387 44.4
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 2.8e-81 306.6 305 51.1
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 8.2e-73 278.5 262 53.4
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 3.8e-70 269.6 266 53.0
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 1.1e-69 268.1 263 51.3
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 2.6e-66 256.9 266 52.3
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 3.3e-66 256.5 290 51.4
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 2.4e-56 223.8 245 46.1
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 1.4e-48 198.0 344 37.8
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 1.1e-45 188.3 276 42.0
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 7.5e-42 175.6 170 54.1
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 4.9e-41 172.9 116 69.8
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 1.1e-40 171.8 112 70.5
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 1.4e-40 171.4 256 39.8
vmacro21235 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 1.0e-30 138.7 114 56.1
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 2.8e-28 130.6 161 44.7
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 2.0e-26 124.4 82 65.9
Glyma.07G037500 Glycine max HOM05D008167 ORTHO05D010296 7.1e-16 89.4 110 47.3
MD15G1365000 Malus domestica HOM05D008167 ORTHO05D010296 4.7e-12 76.6 82 51.2
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 8.1e-12 75.9 49 63.3
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 2.0e-10 71.2 347 23.6
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 2.0e-10 71.2 324 22.5
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 5.8e-10 69.7 338 23.4
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 5.8e-10 69.7 355 23.4
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 7.6e-10 69.3 336 24.4
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 7.6e-10 69.3 334 24.9
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 1.7e-09 68.2 335 24.2
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 4.9e-09 66.6 403 23.3
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 1.9e-08 64.7 334 22.8
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 1.9e-08 64.7 335 22.7
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 2.4e-08 64.3 326 22.7
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 2.4e-08 64.3 332 21.7
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 4.2e-08 63.5 343 22.4
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 4.2e-08 63.5 328 24.1
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 7.1e-08 62.8 333 22.5
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 2.1e-07 61.2 337 22.8
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 2.1e-07 61.2 332 20.8
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 3.5e-07 60.5 333 22.2
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 6.0e-07 59.7 339 23.9
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 7.8e-07 59.3 327 21.4
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 7.8e-07 59.3 334 20.4
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 1.7e-06 58.2 333 21.9
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 2.3e-06 57.8 333 22.8
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 2.3e-06 57.8 336 20.2
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 3.9e-06 57.0 330 20.3
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 3.9e-06 57.0 344 22.4
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 3.9e-06 57.0 402 22.6
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 5.1e-06 56.6 334 21.6
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 6.6e-06 56.2 394 22.3


User provided reference genes

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