Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.4e-50 202.6 101 100.0
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.7e-49 198.4 101 97.0
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 9.6e-47 189.9 101 88.1
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 9.6e-47 189.9 101 88.1
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.1e-45 186.4 102 91.2
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.4e-45 186.0 102 90.2
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.4e-45 185.3 103 89.3
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 4.0e-45 184.5 101 89.1
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.9e-45 183.7 102 89.2
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 9.0e-45 183.3 102 88.2
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 9.0e-45 183.3 102 88.2
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.0e-44 182.2 102 87.3
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 2.6e-44 181.8 102 84.3
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.6e-44 181.8 102 87.3
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 3.4e-44 181.4 102 84.3
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 5.8e-44 180.6 101 89.1
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 5.8e-44 180.6 95 94.7
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 7.6e-44 180.3 102 88.2
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 1.0e-43 179.9 103 85.4
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 4.9e-43 177.6 101 86.1
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.1e-42 176.4 101 87.1
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.4e-42 176.0 104 86.5
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 3.2e-42 174.9 102 82.4
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 9.3e-42 173.3 96 89.6
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.6e-41 172.6 102 86.3
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 7.9e-41 170.2 96 84.4
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.0e-40 169.9 102 83.3
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 3.0e-40 168.3 104 82.7
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.1e-39 166.4 97 83.5
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.1e-39 166.4 95 84.2
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.1e-39 166.4 95 84.2
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.5e-39 166.0 102 83.3
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 1.5e-39 166.0 102 83.3
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.9e-39 165.6 102 81.4
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.5e-39 165.2 103 84.5
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 9.6e-39 163.3 101 79.2
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.3e-38 162.9 101 82.2
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 3.7e-38 161.4 96 83.3
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 6.3e-38 160.6 107 75.7
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 6.3e-38 160.6 107 78.5
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 6.3e-38 160.6 84 92.9
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 8.2e-38 160.2 101 81.2
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.8e-37 159.1 103 80.6
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 2.4e-37 158.7 102 82.4
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 2.4e-37 158.7 102 82.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 3.1e-37 158.3 102 77.5
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 6.9e-37 157.1 106 73.6
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.2e-36 156.4 102 81.4
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 3.4e-36 154.8 110 76.4
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 4.5e-36 154.5 94 83.0
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 4.5e-36 154.5 100 76.0
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 2.9e-35 151.8 112 72.3
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 2.9e-35 151.8 112 72.3
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 3.8e-35 151.4 102 79.4
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 3.8e-35 151.4 91 82.4
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 6.5e-35 150.6 101 77.2
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.1e-34 149.8 95 81.1
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.9e-34 149.1 97 81.4
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 2.5e-34 148.7 100 76.0
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 5.5e-34 147.5 105 74.3
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.2e-33 146.4 99 74.7
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 1.2e-33 146.4 101 70.3
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.6e-33 146.0 107 72.0
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 1.3e-32 142.9 100 74.0
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.8e-32 142.5 114 70.2
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 5.1e-32 141.0 94 77.7
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 1.1e-31 139.8 107 72.9
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.5e-31 139.4 105 72.4
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.5e-31 139.4 105 67.6
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 2.5e-31 138.7 109 68.8
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 3.3e-31 138.3 111 67.6
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 4.3e-31 137.9 108 69.4
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 5.7e-31 137.5 84 82.1
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 7.4e-31 137.1 86 81.4
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 7.4e-31 137.1 113 67.3
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 2.2e-30 135.6 108 70.4
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.8e-30 135.2 109 71.6
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 1.1e-29 133.3 103 71.8
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 1.1e-29 133.3 103 71.8
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 2.4e-29 132.1 111 67.6
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 2.4e-29 132.1 105 70.5
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 3.1e-29 131.7 116 62.9
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 4.1e-29 131.3 115 67.0
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 5.3e-29 131.0 113 67.3
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 5.3e-29 131.0 113 67.3
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 5.3e-29 131.0 111 66.7
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 5.3e-29 131.0 108 63.9
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 6.9e-29 130.6 114 66.7
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 6.9e-29 130.6 111 67.6
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 9.0e-29 130.2 114 64.9
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 2.6e-28 128.6 100 62.0
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.3e-27 126.3 101 60.4
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 8.5e-27 123.6 113 58.4
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.1e-26 123.2 89 73.0
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.4e-26 122.9 105 61.9
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.4e-26 122.9 89 75.3
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 2.5e-26 122.1 107 66.4
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 2.5e-26 122.1 107 66.4
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 2.5e-26 122.1 109 62.4
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 7.2e-26 120.6 114 62.3
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 9.4e-26 120.2 64 96.9
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.2e-25 119.8 109 63.3
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 2.1e-25 119.0 101 65.3
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 2.7e-25 118.6 114 58.8
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 3.6e-25 118.2 113 64.6
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 4.6e-25 117.9 112 58.9
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.0e-24 116.7 86 75.6
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 1.0e-24 116.7 107 61.7
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 6.3e-22 107.5 78 76.9
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 1.4e-21 106.3 56 96.4
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 5.3e-21 104.4 102 55.9
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.2e-18 95.1 94 55.3
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 5.1e-16 87.8 69 72.5
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 8.8e-16 87.0 86 60.5
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 2.6e-15 85.5 82 63.4
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 2.6e-12 75.5 115 44.3
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.0e-11 73.6 101 45.5
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 1.7e-11 72.8 50 78.0
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 1.2e-09 66.6 100 41.0
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 8.0e-09 63.9 57 68.4
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 5.2e-08 61.2 103 42.7


User provided reference genes

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